Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMC5Q8IY18 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMC5Q8IY18 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMC5Q8IY18 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC25.85■■□□□ 1.73
SMC5Q8IY18 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMC5Q8IY18 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.85■■□□□ 1.73
SMC5Q8IY18 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMC5Q8IY18 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMC5Q8IY18 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SMC5Q8IY18 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.85■■□□□ 1.73
SMC5Q8IY18 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMC5Q8IY18 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMC5Q8IY18 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.85■■□□□ 1.73
SMC5Q8IY18 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.85■■□□□ 1.73
SMC5Q8IY18 TERF1P2-201ENST00000583350 1212 ntBASIC25.85■■□□□ 1.73
SMC5Q8IY18 RARRES2P11-201ENST00000635158 484 ntBASIC25.85■■□□□ 1.73
SMC5Q8IY18 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
SMC5Q8IY18 GABARAPL3-202ENST00000624044 1851 ntBASIC25.85■■□□□ 1.73
SMC5Q8IY18 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMC5Q8IY18 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.84■■□□□ 1.73
SMC5Q8IY18 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 AC092667.1-201ENST00000434301 2586 ntBASIC25.84■■□□□ 1.73
SMC5Q8IY18 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 AC123595.1-201ENST00000440769 1046 ntBASIC25.84■■□□□ 1.73
SMC5Q8IY18 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.84■■□□□ 1.73
SMC5Q8IY18 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.84■■□□□ 1.73
SMC5Q8IY18 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.84■■□□□ 1.73
SMC5Q8IY18 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC5Q8IY18 AC011484.1-201ENST00000377652 1995 ntBASIC25.84■■□□□ 1.73
SMC5Q8IY18 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
SMC5Q8IY18 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25.83■■□□□ 1.73
SMC5Q8IY18 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMC5Q8IY18 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.83■■□□□ 1.73
SMC5Q8IY18 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.83■■□□□ 1.73
SMC5Q8IY18 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SMC5Q8IY18 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SMC5Q8IY18 AC010141.2-201ENST00000452426 721 ntBASIC25.83■■□□□ 1.73
SMC5Q8IY18 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
SMC5Q8IY18 AC008175.2-201ENST00000612840 297 ntBASIC25.83■■□□□ 1.73
SMC5Q8IY18 AC007225.1-201ENST00000566331 1836 ntBASIC25.83■■□□□ 1.73
SMC5Q8IY18 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
SMC5Q8IY18 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
SMC5Q8IY18 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SMC5Q8IY18 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMC5Q8IY18 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SMC5Q8IY18 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SMC5Q8IY18 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.82■■□□□ 1.72
SMC5Q8IY18 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMC5Q8IY18 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMC5Q8IY18 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.82■■□□□ 1.72
SMC5Q8IY18 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SMC5Q8IY18 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.82■■□□□ 1.72
SMC5Q8IY18 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.82■■□□□ 1.72
SMC5Q8IY18 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.82■■□□□ 1.72
SMC5Q8IY18 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.82■■□□□ 1.72
SMC5Q8IY18 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.82■■□□□ 1.72
SMC5Q8IY18 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMC5Q8IY18 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMC5Q8IY18 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMC5Q8IY18 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMC5Q8IY18 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.81■■□□□ 1.72
SMC5Q8IY18 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.81■■□□□ 1.72
SMC5Q8IY18 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMC5Q8IY18 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.81■■□□□ 1.72
SMC5Q8IY18 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMC5Q8IY18 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMC5Q8IY18 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMC5Q8IY18 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMC5Q8IY18 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SMC5Q8IY18 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
SMC5Q8IY18 KRT16P2-201ENST00000414673 1423 ntBASIC25.8■■□□□ 1.72
SMC5Q8IY18 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 AC027702.1-201ENST00000563810 1770 ntBASIC25.8■■□□□ 1.72
SMC5Q8IY18 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.8■■□□□ 1.72
SMC5Q8IY18 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.8■■□□□ 1.72
SMC5Q8IY18 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.8■■□□□ 1.72
SMC5Q8IY18 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.8■■□□□ 1.72
SMC5Q8IY18 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
SMC5Q8IY18 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
SMC5Q8IY18 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SMC5Q8IY18 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SMC5Q8IY18 YBX1P1-201ENST00000445822 960 ntBASIC25.79■■□□□ 1.72
SMC5Q8IY18 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
SMC5Q8IY18 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms