Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LYSMD2Q8IV50 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.3■□□□□ 0.52
LYSMD2Q8IV50 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.29■□□□□ 0.52
LYSMD2Q8IV50 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LYSMD2Q8IV50 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 BHLHE23-202ENST00000612929 1109 ntBASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LYSMD2Q8IV50 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
LYSMD2Q8IV50 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.27■□□□□ 0.51
LYSMD2Q8IV50 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.27■□□□□ 0.51
LYSMD2Q8IV50 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.27■□□□□ 0.51
LYSMD2Q8IV50 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYSMD2Q8IV50 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LYSMD2Q8IV50 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 AC004687.1-201ENST00000579003 1625 ntBASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.26■□□□□ 0.51
LYSMD2Q8IV50 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms