Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRC49Q8IUZ0 RARRES2P11-201ENST00000635158 484 ntBASIC21.29■■□□□ 1
LRRC49Q8IUZ0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC49Q8IUZ0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRC49Q8IUZ0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC49Q8IUZ0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC49Q8IUZ0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.29■■□□□ 1
LRRC49Q8IUZ0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC49Q8IUZ0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LRRC49Q8IUZ0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.28■■□□□ 1
LRRC49Q8IUZ0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 MIR935-201ENST00000401179 91 ntBASIC21.27■■□□□ 1
LRRC49Q8IUZ0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 MYCNOS-205ENST00000641950 531 ntBASIC21.27■■□□□ 1
LRRC49Q8IUZ0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.27■■□□□ 1
LRRC49Q8IUZ0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 AC005229.4-201ENST00000610085 2198 ntBASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 AC137761.2-201ENST00000561729 223 ntBASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 AC145350.3-201ENST00000569033 163 ntBASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 UBE2DNL-204ENST00000602536 740 ntBASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 AF106564.1-201ENST00000607058 2553 ntBASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LRRC49Q8IUZ0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LRRC49Q8IUZ0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 RBM17P2-201ENST00000616397 1405 ntBASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
LRRC49Q8IUZ0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 AC006015.1-201ENST00000429970 570 ntBASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRC49Q8IUZ0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms