Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 Z98882.1-201ENST00000622160 2253 ntBASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRTM4Q86VH4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 AC068338.2-201ENST00000563278 1430 ntBASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRTM4Q86VH4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 AL050303.2-201ENST00000619798 666 ntBASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 LINC00565-201ENST00000562710 2331 ntBASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRTM4Q86VH4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 AL591742.1-201ENST00000604433 565 ntBASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRTM4Q86VH4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 AC091799.1-201ENST00000422823 811 ntBASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRTM4Q86VH4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LRRTM4Q86VH4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 NCF1B-203ENST00000435988 1254 ntBASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 AL162412.1-201ENST00000567129 965 ntBASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRTM4Q86VH4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms