Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.869e-9■■■□□ 18.5
LARP4Q71RC2 RNF181-206ENST00000461845 623 ntTSL 211.01□□□□□ -0.652e-7■■■□□ 18.5
LARP4Q71RC2 ATP5E-202ENST00000395659 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.697e-14■■■□□ 18.5
LARP4Q71RC2 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.047e-14■■■□□ 18.5
LARP4Q71RC2 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.387e-14■■■□□ 18.5
LARP4Q71RC2 GSTP1-207ENST00000498765 723 ntTSL 39.36□□□□□ -0.911e-7■■■□□ 18.5
LARP4Q71RC2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.541e-6■■■□□ 18.4
LARP4Q71RC2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.392e-7■■■□□ 18.4
LARP4Q71RC2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.03■□□□□ 0.962e-7■■■□□ 18.4
LARP4Q71RC2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.65■□□□□ 0.92e-7■■■□□ 18.4
LARP4Q71RC2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.64■□□□□ 0.572e-7■■■□□ 18.4
LARP4Q71RC2 PLEKHJ1-208ENST00000588450 2858 ntTSL 217.82■□□□□ 0.442e-7■■■□□ 18.4
LARP4Q71RC2 PLEKHJ1-212ENST00000589791 1329 ntTSL 216.92■□□□□ 0.32e-7■■■□□ 18.4
LARP4Q71RC2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.32e-7■■■□□ 18.4
LARP4Q71RC2 AP000561.1-201ENST00000444130 435 ntTSL 5 BASIC9.02□□□□□ -0.973e-6■■■□□ 18.4
LARP4Q71RC2 ATP5J2-208ENST00000485011 597 ntTSL 210.28□□□□□ -0.766e-9■■■□□ 18.4
LARP4Q71RC2 ATP5J2-212ENST00000524321 584 ntTSL 210.19□□□□□ -0.786e-9■■■□□ 18.4
LARP4Q71RC2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.576e-8■■■□□ 18.4
LARP4Q71RC2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.066e-8■■■□□ 18.4
LARP4Q71RC2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.216e-8■■■□□ 18.4
LARP4Q71RC2 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.326e-8■■■□□ 18.4
LARP4Q71RC2 SNRPE-206ENST00000483099 967 ntTSL 217.72■□□□□ 0.438e-13■■■□□ 18.4
LARP4Q71RC2 SNRPE-202ENST00000414487 942 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.938e-13■■■□□ 18.4
LARP4Q71RC2 SNRPE-205ENST00000475035 532 ntTSL 1 (best)7.91□□□□□ -1.148e-13■■■□□ 18.4
LARP4Q71RC2 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.09□□□□□ -1.438e-13■■■□□ 18.4
LARP4Q71RC2 SNRPE-204ENST00000470492 478 ntTSL 35.22□□□□□ -1.578e-13■■■□□ 18.4
LARP4Q71RC2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.175e-11■■■□□ 18.4
LARP4Q71RC2 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.165e-11■■■□□ 18.4
LARP4Q71RC2 NGDN-210ENST00000556580 629 ntTSL 26.34□□□□□ -1.395e-11■■■□□ 18.4
LARP4Q71RC2 NGDN-211ENST00000556699 725 ntTSL 26.17□□□□□ -1.425e-11■■■□□ 18.4
LARP4Q71RC2 NGDN-209ENST00000556483 838 ntAPPRIS ALT2 TSL 55.03□□□□□ -1.65e-11■■■□□ 18.4
LARP4Q71RC2 NGDN-204ENST00000553439 2763 ntTSL 24.64□□□□□ -1.675e-11■■■□□ 18.4
LARP4Q71RC2 NPC2-208ENST00000556009 699 ntTSL 516.05■□□□□ 0.161e-6■■■□□ 18.4
LARP4Q71RC2 NPC2-204ENST00000553490 729 ntTSL 27.59□□□□□ -1.191e-6■■■□□ 18.4
LARP4Q71RC2 HNRNPM-216ENST00000602219 1809 nt13.55□□□□□ -0.242e-7■■■□□ 18.4
LARP4Q71RC2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17■□□□□ 0.311e-6■■■□□ 18.4
LARP4Q71RC2 FIS1-206ENST00000473527 1005 ntTSL 1 (best)17■□□□□ 0.311e-6■■■□□ 18.4
LARP4Q71RC2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.57■□□□□ 0.081e-6■■■□□ 18.4
LARP4Q71RC2 FIS1-204ENST00000449367 745 ntTSL 215.16■□□□□ 0.021e-6■■■□□ 18.4
LARP4Q71RC2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.141e-6■■■□□ 18.4
LARP4Q71RC2 FIS1-202ENST00000435848 692 ntTSL 513.89□□□□□ -0.191e-6■■■□□ 18.4
LARP4Q71RC2 NDUFC1-204ENST00000503453 682 ntTSL 316.21■□□□□ 0.196e-13■■■□□ 18.4
LARP4Q71RC2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.146e-13■■■□□ 18.4
LARP4Q71RC2 NDUFC1-202ENST00000394225 664 ntTSL 214.2□□□□□ -0.146e-13■■■□□ 18.4
LARP4Q71RC2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.156e-13■■■□□ 18.4
LARP4Q71RC2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.196e-13■■■□□ 18.4
LARP4Q71RC2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.326e-13■■■□□ 18.4
LARP4Q71RC2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.326e-13■■■□□ 18.4
LARP4Q71RC2 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.616e-13■■■□□ 18.4
LARP4Q71RC2 NDUFC1-205ENST00000503997 628 ntTSL 39.63□□□□□ -0.876e-13■■■□□ 18.4
LARP4Q71RC2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.022e-7■■■□□ 18.4
LARP4Q71RC2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.16e-13■■■□□ 18.4
LARP4Q71RC2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.86□□□□□ -0.196e-13■■■□□ 18.4
LARP4Q71RC2 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.55□□□□□ -0.246e-13■■■□□ 18.4
LARP4Q71RC2 MAP2K3-208ENST00000496046 2089 ntTSL 512.61□□□□□ -0.396e-13■■■□□ 18.4
LARP4Q71RC2 MAP2K3-204ENST00000395491 2401 ntTSL 212.41□□□□□ -0.426e-13■■■□□ 18.4
LARP4Q71RC2 IFITM2-201ENST00000399815 382 ntTSL 312.19□□□□□ -0.461e-13■■■□□ 18.4
LARP4Q71RC2 IFITM2-203ENST00000527146 634 ntTSL 311.93□□□□□ -0.51e-13■■■□□ 18.4
LARP4Q71RC2 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.551e-13■■■□□ 18.4
LARP4Q71RC2 IFITM2-202ENST00000399817 659 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.611e-13■■■□□ 18.4
LARP4Q71RC2 IFITM2-206ENST00000616316 892 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.941e-13■■■□□ 18.4
LARP4Q71RC2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.073e-6■■■□□ 18.3
LARP4Q71RC2 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.94□□□□□ -0.183e-6■■■□□ 18.3
LARP4Q71RC2 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.483e-6■■■□□ 18.3
LARP4Q71RC2 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.324e-10■■■□□ 18.3
LARP4Q71RC2 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.424e-10■■■□□ 18.3
LARP4Q71RC2 CYC1-204ENST00000533444 1832 ntTSL 1 (best)26.48■■□□□ 1.833e-14■■■□□ 18.3
LARP4Q71RC2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.763e-14■■■□□ 18.3
LARP4Q71RC2 ATP6V0B-203ENST00000468183 2432 ntTSL 1 (best)22.26■■□□□ 1.154e-8■■■□□ 18.3
LARP4Q71RC2 ATP6V0B-208ENST00000473485 1664 ntTSL 221.98■■□□□ 1.114e-8■■■□□ 18.3
LARP4Q71RC2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.684e-8■■■□□ 18.3
LARP4Q71RC2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.18■□□□□ 0.54e-8■■■□□ 18.3
LARP4Q71RC2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.57□□□□□ -0.244e-8■■■□□ 18.3
LARP4Q71RC2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.57□□□□□ -0.244e-8■■■□□ 18.3
LARP4Q71RC2 HDGF-205ENST00000469145 844 ntTSL 219.41■□□□□ 0.75e-9■■■□□ 18.3
LARP4Q71RC2 HDGF-206ENST00000471377 592 ntTSL 38.6□□□□□ -1.035e-9■■■□□ 18.3
LARP4Q71RC2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.12e-6■■■□□ 18.3
LARP4Q71RC2 PSMD2-218ENST00000491494 371 ntTSL 215.6■□□□□ 0.092e-6■■■□□ 18.3
LARP4Q71RC2 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.75□□□□□ -0.372e-6■■■□□ 18.3
LARP4Q71RC2 PSMD2-212ENST00000473991 590 ntTSL 311.46□□□□□ -0.572e-6■■■□□ 18.3
LARP4Q71RC2 PSMD2-206ENST00000439383 2633 ntTSL 2 BASIC10.4□□□□□ -0.742e-6■■■□□ 18.3
LARP4Q71RC2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.48■□□□□ 0.552e-7■■■□□ 18.3
LARP4Q71RC2 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.78□□□□□ -0.362e-7■■■□□ 18.3
LARP4Q71RC2 HAX1-203ENST00000447768 842 ntTSL 59.45□□□□□ -0.91e-7■■■□□ 18.3
LARP4Q71RC2 PCSK1N-202ENST00000611033 392 ntTSL 311.35□□□□□ -0.592e-11■■■□□ 18.2
LARP4Q71RC2 HLA-C-207ENST00000484378 862 nt25.84■■□□□ 1.735e-11■■■□□ 18.2
LARP4Q71RC2 ABHD16A-214ENST00000495769 1892 ntTSL 518.63■□□□□ 0.572e-6■■■□□ 18.2
LARP4Q71RC2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.112e-6■■■□□ 18.2
LARP4Q71RC2 ABHD16A-207ENST00000475742 1319 ntTSL 514.65□□□□□ -0.062e-6■■■□□ 18.2
LARP4Q71RC2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.142e-6■■■□□ 18.2
LARP4Q71RC2 ABHD16A-212ENST00000492084 2260 ntTSL 213.98□□□□□ -0.172e-6■■■□□ 18.2
LARP4Q71RC2 ABHD16A-204ENST00000468205 913 ntTSL 212.2□□□□□ -0.462e-6■■■□□ 18.2
LARP4Q71RC2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.37■■□□□ 1.651e-11■■■□□ 18.2
LARP4Q71RC2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.331e-11■■■□□ 18.2
LARP4Q71RC2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.29■□□□□ 0.681e-11■■■□□ 18.2
LARP4Q71RC2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.92■□□□□ 0.31e-11■■■□□ 18.2
LARP4Q71RC2 MAZ-209ENST00000565777 1313 ntTSL 215.75■□□□□ 0.111e-11■■■□□ 18.2
LARP4Q71RC2 MAZ-213ENST00000568411 599 ntTSL 313.63□□□□□ -0.231e-11■■■□□ 18.2
LARP4Q71RC2 P3H1-203ENST00000372526 654 ntTSL 316.45■□□□□ 0.223e-6■■■□□ 18.2
LARP4Q71RC2 P3H1-213ENST00000492956 3001 ntTSL 1 (best)14.04□□□□□ -0.163e-6■■■□□ 18.2
Retrieved 100 of 15,922 protein–RNA pairs in 244.6 ms