RNA–Protein interactions for RNA: ENST00000556580.4

NGDN-210, Transcript of neuroguidin, humanhuman

TSL 2

Gene NGDN, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-210ENST00000556580 AEBP2Q6ZN18 517 aaPredicted RBP22.76■■□□□ 1.23
NGDN-210ENST00000556580 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
NGDN-210ENST00000556580 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
NGDN-210ENST00000556580 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
NGDN-210ENST00000556580 FOXD1Q16676 465 aa18.07■□□□□ 0.48
NGDN-210ENST00000556580 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
NGDN-210ENST00000556580 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
NGDN-210ENST00000556580 ADRA2BP18089 450 aa16.91■□□□□ 0.3
NGDN-210ENST00000556580 MSH5O43196 834 aa16.89■□□□□ 0.29
NGDN-210ENST00000556580 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
NGDN-210ENST00000556580 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
NGDN-210ENST00000556580 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
NGDN-210ENST00000556580 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
NGDN-210ENST00000556580 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
NGDN-210ENST00000556580 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
NGDN-210ENST00000556580 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
NGDN-210ENST00000556580 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
NGDN-210ENST00000556580 KCNA4P22459 653 aa14.93□□□□□ -0.02
NGDN-210ENST00000556580 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
NGDN-210ENST00000556580 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
NGDN-210ENST00000556580 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
NGDN-210ENST00000556580 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
NGDN-210ENST00000556580 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
NGDN-210ENST00000556580 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
NGDN-210ENST00000556580 RNF39Q9H2S5 420 aa14.42□□□□□ -0.1
NGDN-210ENST00000556580 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
NGDN-210ENST00000556580 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
NGDN-210ENST00000556580 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
NGDN-210ENST00000556580 C1QBPQ07021 282 aaKnown RBP14.24□□□□□ -0.13
NGDN-210ENST00000556580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.144e-9■■■□□ 18.7
NGDN-210ENST00000556580 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
NGDN-210ENST00000556580 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
NGDN-210ENST00000556580 ZBTB22O15209 634 aa13.72□□□□□ -0.21
NGDN-210ENST00000556580 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
NGDN-210ENST00000556580 NISCHQ9Y2I1 1504 aa13.63□□□□□ -0.23
NGDN-210ENST00000556580 CAPN15O75808 1086 aa13.59□□□□□ -0.23
NGDN-210ENST00000556580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
NGDN-210ENST00000556580 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
NGDN-210ENST00000556580 DSG3P32926 999 aa13.54□□□□□ -0.24
NGDN-210ENST00000556580 APLP2Q06481 763 aa13.54□□□□□ -0.24
NGDN-210ENST00000556580 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
NGDN-210ENST00000556580 SLC24A1O60721 1099 aa13.51□□□□□ -0.25
NGDN-210ENST00000556580 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
NGDN-210ENST00000556580 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
NGDN-210ENST00000556580 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
NGDN-210ENST00000556580 AMER1Q5JTC6 1135 aaPredicted RBP13.41□□□□□ -0.26
NGDN-210ENST00000556580 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
NGDN-210ENST00000556580 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
NGDN-210ENST00000556580 ABCB7O75027 752 aa13.27□□□□□ -0.29
NGDN-210ENST00000556580 POLA2Q14181 598 aa13.1□□□□□ -0.31
NGDN-210ENST00000556580 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
NGDN-210ENST00000556580 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
NGDN-210ENST00000556580 FKBP8Q14318 412 aa12.98□□□□□ -0.33
NGDN-210ENST00000556580 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
NGDN-210ENST00000556580 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
NGDN-210ENST00000556580 POTEHQ6S545 545 aa12.76□□□□□ -0.37
NGDN-210ENST00000556580 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
NGDN-210ENST00000556580 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
NGDN-210ENST00000556580 FBLN2P98095 1184 aa12.57□□□□□ -0.4
NGDN-210ENST00000556580 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
NGDN-210ENST00000556580 REM2Q8IYK8 340 aaPredicted RBP12.51□□□□□ -0.41
NGDN-210ENST00000556580 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
NGDN-210ENST00000556580 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
NGDN-210ENST00000556580 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
NGDN-210ENST00000556580 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
NGDN-210ENST00000556580 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
NGDN-210ENST00000556580 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
NGDN-210ENST00000556580 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
NGDN-210ENST00000556580 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
NGDN-210ENST00000556580 PLCB2Q00722 1185 aa12.3□□□□□ -0.44
NGDN-210ENST00000556580 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
NGDN-210ENST00000556580 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
NGDN-210ENST00000556580 SPDYE1Q8NFV5 336 aaPredicted RBP12.22□□□□□ -0.45
NGDN-210ENST00000556580 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
NGDN-210ENST00000556580 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
NGDN-210ENST00000556580 HAP1P54257 671 aaPredicted RBP12.14□□□□□ -0.47
NGDN-210ENST00000556580 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
NGDN-210ENST00000556580 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
NGDN-210ENST00000556580 BCANQ96GW7 911 aa12.09□□□□□ -0.47
NGDN-210ENST00000556580 DCAF8L2P0C7V8 631 aa12.07□□□□□ -0.48
NGDN-210ENST00000556580 CCDC180Q9P1Z9 1646 aa12.06□□□□□ -0.48
NGDN-210ENST00000556580 PROM2Q8N271 834 aa12.05□□□□□ -0.48
NGDN-210ENST00000556580 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
NGDN-210ENST00000556580 HAX1O00165 279 aa12.03□□□□□ -0.48
NGDN-210ENST00000556580 SP7Q8TDD2 431 aaPredicted RBP12.02□□□□□ -0.49
NGDN-210ENST00000556580 PRR29P0C7W0 189 aa12□□□□□ -0.49
NGDN-210ENST00000556580 VSIG10Q8N0Z9 540 aa11.99□□□□□ -0.49
NGDN-210ENST00000556580 IFNLR1Q8IU57 520 aaPredicted RBP11.97□□□□□ -0.49
NGDN-210ENST00000556580 PKD2Q13563 968 aa11.91□□□□□ -0.5
NGDN-210ENST00000556580 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
NGDN-210ENST00000556580 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
NGDN-210ENST00000556580 EVX2Q03828 476 aa11.9□□□□□ -0.5
NGDN-210ENST00000556580 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
NGDN-210ENST00000556580 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
NGDN-210ENST00000556580 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
NGDN-210ENST00000556580 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
NGDN-210ENST00000556580 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
NGDN-210ENST00000556580 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
NGDN-210ENST00000556580 ABCC9O60706 1549 aa11.75□□□□□ -0.53
NGDN-210ENST00000556580 SPOCK2Q92563 424 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms