RNA–Protein interactions for RNA: ENST00000556483.5

NGDN-209, Transcript of neuroguidin, humanhuman

APPRIS ALT2 TSL 5

Gene NGDN, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGDN-209ENST00000556483 AEBP2Q6ZN18 517 aaPredicted RBP17.85■□□□□ 0.45
NGDN-209ENST00000556483 CHIC1Q5VXU3 224 aa16.91■□□□□ 0.3
NGDN-209ENST00000556483 SENP3Q9H4L4 574 aaPredicted RBP15.05■□□□□ -0
NGDN-209ENST00000556483 PHF23Q9BUL5 403 aaPredicted RBP14.94□□□□□ -0.02
NGDN-209ENST00000556483 FOXD1Q16676 465 aa14.14□□□□□ -0.15
NGDN-209ENST00000556483 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
NGDN-209ENST00000556483 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
NGDN-209ENST00000556483 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
NGDN-209ENST00000556483 ADRA2BP18089 450 aa13.28□□□□□ -0.28
NGDN-209ENST00000556483 PIAS4Q8N2W9 510 aaPredicted RBP13.2□□□□□ -0.3
NGDN-209ENST00000556483 MSH5O43196 834 aa13.06□□□□□ -0.32
NGDN-209ENST00000556483 NISCHQ9Y2I1 1504 aa12.89□□□□□ -0.35
NGDN-209ENST00000556483 MAPK8IP2Q13387 824 aaPredicted RBP12.21□□□□□ -0.45
NGDN-209ENST00000556483 DMRT2Q9Y5R5 561 aa11.98□□□□□ -0.49
NGDN-209ENST00000556483 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
NGDN-209ENST00000556483 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
NGDN-209ENST00000556483 CNKSR2Q8WXI2 1034 aa11.58□□□□□ -0.56
NGDN-209ENST00000556483 DCAF8L1A6NGE4 600 aa11.57□□□□□ -0.56
NGDN-209ENST00000556483 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
NGDN-209ENST00000556483 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
NGDN-209ENST00000556483 CACNB1Q02641 598 aaPredicted RBP11.4□□□□□ -0.58
NGDN-209ENST00000556483 CCDC180Q9P1Z9 1646 aa11.32□□□□□ -0.6
NGDN-209ENST00000556483 NCBP3Q53F19 620 aaKnown RBP11.32□□□□□ -0.6
NGDN-209ENST00000556483 NPM3O75607 178 aaKnown RBP11.31□□□□□ -0.6
NGDN-209ENST00000556483 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
NGDN-209ENST00000556483 KCNA4P22459 653 aa11.2□□□□□ -0.62
NGDN-209ENST00000556483 ABCC9O60706 1549 aa11.18□□□□□ -0.62
NGDN-209ENST00000556483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.02□□□□□ -0.652e-8■■■□□ 15.7
NGDN-209ENST00000556483 C1QBPQ07021 282 aaKnown RBP10.99□□□□□ -0.65
NGDN-209ENST00000556483 DNAJC5BQ9UF47 199 aa10.98□□□□□ -0.65
NGDN-209ENST00000556483 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
NGDN-209ENST00000556483 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
NGDN-209ENST00000556483 SLC4A2P04920 1241 aa10.81□□□□□ -0.68
NGDN-209ENST00000556483 NACADO15069 1562 aa10.77□□□□□ -0.68
NGDN-209ENST00000556483 RB1CC1Q8TDY2 1594 aa10.76□□□□□ -0.69
NGDN-209ENST00000556483 MYO15BQ96JP2 1530 aa10.75□□□□□ -0.69
NGDN-209ENST00000556483 SPINK5Q9NQ38 1064 aaPredicted RBP10.73□□□□□ -0.69
NGDN-209ENST00000556483 ZCCHC6Q5VYS8 1495 aaKnown RBP10.69□□□□□ -0.7
NGDN-209ENST00000556483 DCAF1Q9Y4B6 1507 aa10.68□□□□□ -0.7
NGDN-209ENST00000556483 CAPN15O75808 1086 aa10.64□□□□□ -0.71
NGDN-209ENST00000556483 DSG3P32926 999 aa10.55□□□□□ -0.72
NGDN-209ENST00000556483 PABPN1Q86U42 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
NGDN-209ENST00000556483 TRHP20396 242 aaPredicted RBP10.51□□□□□ -0.73
NGDN-209ENST00000556483 SLC4A1APQ9BWU0 796 aaKnown RBP10.51□□□□□ -0.73
NGDN-209ENST00000556483 ABCB7O75027 752 aa10.48□□□□□ -0.73
NGDN-209ENST00000556483 SHROOM4Q9ULL8 1493 aa10.38□□□□□ -0.75
NGDN-209ENST00000556483 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
NGDN-209ENST00000556483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.37□□□□□ -0.75
NGDN-209ENST00000556483 HNRNPUL2Q1KMD3 747 aaKnown RBP10.37□□□□□ -0.75
NGDN-209ENST00000556483 SAMD1Q6SPF0 538 aaPredicted RBP10.37□□□□□ -0.75
NGDN-209ENST00000556483 ZNF219Q9P2Y4 722 aaPredicted RBP10.36□□□□□ -0.75
NGDN-209ENST00000556483 POTEHQ6S545 545 aa10.35□□□□□ -0.75
NGDN-209ENST00000556483 SCRIBQ14160 1630 aa10.34□□□□□ -0.75
NGDN-209ENST00000556483 ZBTB22O15209 634 aa10.34□□□□□ -0.75
NGDN-209ENST00000556483 BICRAQ9NZM4 1560 aa10.34□□□□□ -0.75
NGDN-209ENST00000556483 APLP2Q06481 763 aa10.33□□□□□ -0.76
NGDN-209ENST00000556483 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
NGDN-209ENST00000556483 ATF5Q9Y2D1 282 aaPredicted RBP10.3□□□□□ -0.76
NGDN-209ENST00000556483 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
NGDN-209ENST00000556483 EHMT2Q96KQ7 1210 aa10.22□□□□□ -0.77
NGDN-209ENST00000556483 POLA2Q14181 598 aa10.21□□□□□ -0.77
NGDN-209ENST00000556483 EIF4G1Q04637 1599 aaKnown RBP10.12□□□□□ -0.79
NGDN-209ENST00000556483 CECR2Q9BXF3 1484 aa10.09□□□□□ -0.79
NGDN-209ENST00000556483 CC2D2AQ9P2K1 1620 aa10.05□□□□□ -0.8
NGDN-209ENST00000556483 NCAPD3P42695 1498 aa10□□□□□ -0.81
NGDN-209ENST00000556483 BAZ1AQ9NRL2 1556 aaPredicted RBP9.98□□□□□ -0.81
NGDN-209ENST00000556483 ATAD2BQ9ULI0 1458 aa9.96□□□□□ -0.82
NGDN-209ENST00000556483 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
NGDN-209ENST00000556483 SMARCA2P51531 1590 aa9.94□□□□□ -0.82
NGDN-209ENST00000556483 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
NGDN-209ENST00000556483 SMARCA4P51532 1647 aa9.91□□□□□ -0.82
NGDN-209ENST00000556483 ATXN8OSP0DMR3 200 aa9.9□□□□□ -0.82
NGDN-209ENST00000556483 MROH2BQ7Z745 1585 aa9.89□□□□□ -0.83
NGDN-209ENST00000556483 BAZ1BQ9UIG0 1483 aaKnown RBP9.87□□□□□ -0.83
NGDN-209ENST00000556483 CSRNP3Q8WYN3 585 aa9.87□□□□□ -0.83
NGDN-209ENST00000556483 RSF1Q96T23 1441 aaPredicted RBP9.86□□□□□ -0.83
NGDN-209ENST00000556483 ZBTB12Q9Y330 459 aaPredicted RBP9.86□□□□□ -0.83
NGDN-209ENST00000556483 PEG3Q9GZU2 1588 aa9.85□□□□□ -0.83
NGDN-209ENST00000556483 HMGXB3Q12766 1538 aa9.85□□□□□ -0.83
NGDN-209ENST00000556483 MKRN4PQ13434 485 aaPredicted RBP9.8□□□□□ -0.84
NGDN-209ENST00000556483 CHRDL2Q6WN34 429 aa9.8□□□□□ -0.84
NGDN-209ENST00000556483 AKT1S1Q96B36 256 aa9.77□□□□□ -0.85
NGDN-209ENST00000556483 REM2Q8IYK8 340 aaPredicted RBP9.75□□□□□ -0.85
NGDN-209ENST00000556483 CADPSQ9ULU8 1353 aa9.74□□□□□ -0.85
NGDN-209ENST00000556483 PDS5BQ9NTI5 1447 aa9.72□□□□□ -0.85
NGDN-209ENST00000556483 SUPT5HO00267 1087 aaKnown RBP9.71□□□□□ -0.86
NGDN-209ENST00000556483 FBLN2P98095 1184 aa9.71□□□□□ -0.86
NGDN-209ENST00000556483 WIZO95785 1651 aa9.71□□□□□ -0.86
NGDN-209ENST00000556483 ERCC6Q03468 1493 aa9.69□□□□□ -0.86
NGDN-209ENST00000556483 TOP2AP11388 1531 aaKnown RBP9.68□□□□□ -0.86
NGDN-209ENST00000556483 PITPNM1O00562 1244 aa9.68□□□□□ -0.86
NGDN-209ENST00000556483 LAMC3Q9Y6N6 1575 aa9.64□□□□□ -0.87
NGDN-209ENST00000556483 NESP48681 1621 aa9.64□□□□□ -0.87
NGDN-209ENST00000556483 CCDC88BA6NC98 1476 aa9.63□□□□□ -0.87
NGDN-209ENST00000556483 CFTRP13569 1480 aa9.63□□□□□ -0.87
NGDN-209ENST00000556483 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
NGDN-209ENST00000556483 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
NGDN-209ENST00000556483 SPDYE2Q495Y8 402 aa9.62□□□□□ -0.87
NGDN-209ENST00000556483 PIP4P2Q8N4L2 257 aa9.62□□□□□ -0.87
NGDN-209ENST00000556483 CUX2O14529 1486 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms