RNA–Protein interactions for RNA: ENST00000367208.1

SNRPE-201, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 2 BASIC

Gene SNRPE, Length 355 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-201ENST00000367208 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.14
SNRPE-201ENST00000367208 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
SNRPE-201ENST00000367208 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
SNRPE-201ENST00000367208 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
SNRPE-201ENST00000367208 PLPPR3Q6T4P5 718 aa17.96■□□□□ 0.47
SNRPE-201ENST00000367208 FOXD1Q16676 465 aa17.4■□□□□ 0.38
SNRPE-201ENST00000367208 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
SNRPE-201ENST00000367208 ADRA2BP18089 450 aa16.93■□□□□ 0.3
SNRPE-201ENST00000367208 PIAS4Q8N2W9 510 aaPredicted RBP16.42■□□□□ 0.22
SNRPE-201ENST00000367208 MSH5O43196 834 aa15.93■□□□□ 0.14
SNRPE-201ENST00000367208 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
SNRPE-201ENST00000367208 KCNA4P22459 653 aa15.79■□□□□ 0.12
SNRPE-201ENST00000367208 SCAF1Q9H7N4 1312 aaKnown RBP15.52■□□□□ 0.08
SNRPE-201ENST00000367208 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
SNRPE-201ENST00000367208 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
SNRPE-201ENST00000367208 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
SNRPE-201ENST00000367208 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
SNRPE-201ENST00000367208 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
SNRPE-201ENST00000367208 DMRT2Q9Y5R5 561 aa15.06■□□□□ 0
SNRPE-201ENST00000367208 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
SNRPE-201ENST00000367208 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
SNRPE-201ENST00000367208 HOXD11P31277 338 aaPredicted RBP14.9□□□□□ -0.02
SNRPE-201ENST00000367208 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
SNRPE-201ENST00000367208 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
SNRPE-201ENST00000367208 ZBTB22O15209 634 aa14.55□□□□□ -0.08
SNRPE-201ENST00000367208 FOXD4L1Q9NU39 408 aa14.46□□□□□ -0.09
SNRPE-201ENST00000367208 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
SNRPE-201ENST00000367208 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
SNRPE-201ENST00000367208 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
SNRPE-201ENST00000367208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNRPE-201ENST00000367208 ATXN8OSP0DMR3 200 aa14□□□□□ -0.17
SNRPE-201ENST00000367208 POTEDQ86YR6 584 aa13.98□□□□□ -0.17
SNRPE-201ENST00000367208 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
SNRPE-201ENST00000367208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.88□□□□□ -0.19
SNRPE-201ENST00000367208 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
SNRPE-201ENST00000367208 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
SNRPE-201ENST00000367208 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
SNRPE-201ENST00000367208 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
SNRPE-201ENST00000367208 APLP2Q06481 763 aa13.65□□□□□ -0.22
SNRPE-201ENST00000367208 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
SNRPE-201ENST00000367208 ZNF219Q9P2Y4 722 aaPredicted RBP13.48□□□□□ -0.25
SNRPE-201ENST00000367208 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
SNRPE-201ENST00000367208 CAPN15O75808 1086 aa13.33□□□□□ -0.28
SNRPE-201ENST00000367208 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
SNRPE-201ENST00000367208 POLA2Q14181 598 aa13.23□□□□□ -0.29
SNRPE-201ENST00000367208 FKBP8Q14318 412 aa13.21□□□□□ -0.29
SNRPE-201ENST00000367208 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
SNRPE-201ENST00000367208 DSG3P32926 999 aa13.12□□□□□ -0.31
SNRPE-201ENST00000367208 FBLN2P98095 1184 aa13.09□□□□□ -0.31
SNRPE-201ENST00000367208 ABCB7O75027 752 aa13.08□□□□□ -0.32
SNRPE-201ENST00000367208 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
SNRPE-201ENST00000367208 CACNB1Q02641 598 aaPredicted RBP13.05□□□□□ -0.32
SNRPE-201ENST00000367208 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
SNRPE-201ENST00000367208 PROM2Q8N271 834 aa12.9□□□□□ -0.34
SNRPE-201ENST00000367208 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
SNRPE-201ENST00000367208 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
SNRPE-201ENST00000367208 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
SNRPE-201ENST00000367208 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
SNRPE-201ENST00000367208 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
SNRPE-201ENST00000367208 SSUH2Q9Y2M2 353 aa12.7□□□□□ -0.38
SNRPE-201ENST00000367208 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
SNRPE-201ENST00000367208 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
SNRPE-201ENST00000367208 PABPN1Q86U42 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNRPE-201ENST00000367208 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
SNRPE-201ENST00000367208 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
SNRPE-201ENST00000367208 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
SNRPE-201ENST00000367208 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
SNRPE-201ENST00000367208 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
SNRPE-201ENST00000367208 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
SNRPE-201ENST00000367208 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.45
SNRPE-201ENST00000367208 SPDYE1Q8NFV5 336 aaPredicted RBP12.27□□□□□ -0.45
SNRPE-201ENST00000367208 MIER1Q8N108 512 aa12.23□□□□□ -0.45
SNRPE-201ENST00000367208 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
SNRPE-201ENST00000367208 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
SNRPE-201ENST00000367208 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
SNRPE-201ENST00000367208 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
SNRPE-201ENST00000367208 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
SNRPE-201ENST00000367208 CLEC11AQ9Y240 323 aa12.13□□□□□ -0.47
SNRPE-201ENST00000367208 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
SNRPE-201ENST00000367208 PITPNM1O00562 1244 aa12.11□□□□□ -0.47
SNRPE-201ENST00000367208 PKD2Q13563 968 aa12.1□□□□□ -0.47
SNRPE-201ENST00000367208 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
SNRPE-201ENST00000367208 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
SNRPE-201ENST00000367208 NUBP1P53384 320 aa11.96□□□□□ -0.49
SNRPE-201ENST00000367208 ECM2O94769 699 aaPredicted RBP11.91□□□□□ -0.5
SNRPE-201ENST00000367208 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNRPE-201ENST00000367208 GSE1Q14687 1217 aa11.88□□□□□ -0.51
SNRPE-201ENST00000367208 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
SNRPE-201ENST00000367208 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
SNRPE-201ENST00000367208 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
SNRPE-201ENST00000367208 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
SNRPE-201ENST00000367208 CHADLQ6NUI6 762 aa11.82□□□□□ -0.52
SNRPE-201ENST00000367208 RGL2O15211 777 aa11.81□□□□□ -0.52
SNRPE-201ENST00000367208 DCAF8Q5TAQ9 597 aa11.8□□□□□ -0.52
SNRPE-201ENST00000367208 RASEFQ8IZ41 740 aa11.8□□□□□ -0.52
SNRPE-201ENST00000367208 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
SNRPE-201ENST00000367208 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
SNRPE-201ENST00000367208 PRKAR2AP13861 404 aaKnown RBP11.79□□□□□ -0.52
SNRPE-201ENST00000367208 SLC24A1O60721 1099 aa11.78□□□□□ -0.52
SNRPE-201ENST00000367208 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms