Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM53Q6P2H8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 OR7E47P-201ENST00000546390 1422 ntBASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM53Q6P2H8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 AC139530.1-201ENST00000575312 1977 ntBASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEM53Q6P2H8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM53Q6P2H8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM53Q6P2H8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms