Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RNF213Q63HN8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RNF213Q63HN8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RNF213Q63HN8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC11.31□□□□□ -0.6
RNF213Q63HN8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RNF213Q63HN8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RNF213Q63HN8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
RNF213Q63HN8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RNF213Q63HN8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.3□□□□□ -0.6
RNF213Q63HN8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RNF213Q63HN8 KRT16P2-201ENST00000414673 1423 ntBASIC11.3□□□□□ -0.6
RNF213Q63HN8 AC027702.1-201ENST00000563810 1770 ntBASIC11.3□□□□□ -0.6
RNF213Q63HN8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RNF213Q63HN8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 NAPSB-206ENST00000562112 1266 ntBASIC11.3□□□□□ -0.6
RNF213Q63HN8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RNF213Q63HN8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 HMGN1P19-201ENST00000436976 333 ntBASIC11.3□□□□□ -0.6
RNF213Q63HN8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 AF186192.3-201ENST00000583427 947 ntBASIC11.3□□□□□ -0.6
RNF213Q63HN8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.3□□□□□ -0.6
RNF213Q63HN8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
RNF213Q63HN8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
RNF213Q63HN8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC11.29□□□□□ -0.6
RNF213Q63HN8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RNF213Q63HN8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
RNF213Q63HN8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RNF213Q63HN8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
RNF213Q63HN8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RNF213Q63HN8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC11.29□□□□□ -0.6
RNF213Q63HN8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RNF213Q63HN8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.29□□□□□ -0.6
RNF213Q63HN8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.29□□□□□ -0.6
RNF213Q63HN8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC11.29□□□□□ -0.6
RNF213Q63HN8 AL589743.5-201ENST00000616611 1050 ntBASIC11.29□□□□□ -0.6
RNF213Q63HN8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RNF213Q63HN8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RNF213Q63HN8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC11.29□□□□□ -0.6
RNF213Q63HN8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RNF213Q63HN8 AC022616.7-201ENST00000525383 220 ntBASIC11.29□□□□□ -0.6
RNF213Q63HN8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC11.29□□□□□ -0.6
RNF213Q63HN8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RNF213Q63HN8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RNF213Q63HN8 AC139887.4-201ENST00000607877 719 ntBASIC11.29□□□□□ -0.6
RNF213Q63HN8 OR7E47P-201ENST00000546390 1422 ntBASIC11.29□□□□□ -0.6
RNF213Q63HN8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 AC068587.7-201ENST00000641602 218 ntBASIC11.28□□□□□ -0.6
RNF213Q63HN8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 RBM17P1-201ENST00000453646 1190 ntBASIC11.28□□□□□ -0.6
RNF213Q63HN8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC11.28□□□□□ -0.6
RNF213Q63HN8 SAPCD2P2-201ENST00000431719 1174 ntBASIC11.28□□□□□ -0.6
RNF213Q63HN8 DUSP8P3-201ENST00000399571 1760 ntBASIC11.28□□□□□ -0.6
RNF213Q63HN8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RNF213Q63HN8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RNF213Q63HN8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RNF213Q63HN8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC11.27□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms