Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00242Q5T6M2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 MIR3621-201ENST00000580529 85 ntBASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINC00242Q5T6M2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 AL138724.1-201ENST00000606771 1088 ntBASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00242Q5T6M2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00242Q5T6M2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC00242Q5T6M2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00242Q5T6M2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00242Q5T6M2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
LINC00242Q5T6M2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms