Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRFAM7AQ494W8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CHRFAM7AQ494W8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRFAM7AQ494W8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRFAM7AQ494W8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHRFAM7AQ494W8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRFAM7AQ494W8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHRFAM7AQ494W8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRFAM7AQ494W8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 AC010525.1-201ENST00000585559 441 ntBASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRFAM7AQ494W8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHRFAM7AQ494W8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHRFAM7AQ494W8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CHRFAM7AQ494W8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 AL499627.2-201ENST00000606283 725 ntBASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.13■□□□□ 0.49
CHRFAM7AQ494W8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 CD99P1-205ENST00000527459 561 ntBASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHRFAM7AQ494W8 FEM1AP4-201ENST00000443167 1987 ntBASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHRFAM7AQ494W8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms