Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB3Q15768 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB3Q15768 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB3Q15768 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB3Q15768 AC091799.1-201ENST00000422823 811 ntBASIC17.8■□□□□ 0.44
EFNB3Q15768 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.8■□□□□ 0.44
EFNB3Q15768 AL138781.1-201ENST00000566567 1274 ntBASIC17.8■□□□□ 0.44
EFNB3Q15768 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.8■□□□□ 0.44
EFNB3Q15768 AC016405.3-201ENST00000607710 860 ntBASIC17.8■□□□□ 0.44
EFNB3Q15768 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.8■□□□□ 0.44
EFNB3Q15768 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.8■□□□□ 0.44
EFNB3Q15768 AC133041.1-202ENST00000642053 222 ntBASIC17.8■□□□□ 0.44
EFNB3Q15768 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB3Q15768 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB3Q15768 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
EFNB3Q15768 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB3Q15768 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EFNB3Q15768 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB3Q15768 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.79■□□□□ 0.44
EFNB3Q15768 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB3Q15768 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.79■□□□□ 0.44
EFNB3Q15768 AC069152.1-201ENST00000438030 544 ntBASIC17.79■□□□□ 0.44
EFNB3Q15768 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.79■□□□□ 0.44
EFNB3Q15768 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.79■□□□□ 0.44
EFNB3Q15768 MIR4758-201ENST00000577688 71 ntBASIC17.79■□□□□ 0.44
EFNB3Q15768 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.79■□□□□ 0.44
EFNB3Q15768 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB3Q15768 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB3Q15768 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB3Q15768 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
EFNB3Q15768 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EFNB3Q15768 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
EFNB3Q15768 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.78■□□□□ 0.44
EFNB3Q15768 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
EFNB3Q15768 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
EFNB3Q15768 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
EFNB3Q15768 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.78■□□□□ 0.44
EFNB3Q15768 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.78■□□□□ 0.44
EFNB3Q15768 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
EFNB3Q15768 MIPEPP3-201ENST00000412105 444 ntBASIC17.78■□□□□ 0.44
EFNB3Q15768 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.78■□□□□ 0.44
EFNB3Q15768 AC093787.1-201ENST00000450396 207 ntBASIC17.78■□□□□ 0.44
EFNB3Q15768 CDV3P1-201ENST00000471403 739 ntBASIC17.78■□□□□ 0.44
EFNB3Q15768 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.78■□□□□ 0.44
EFNB3Q15768 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.78■□□□□ 0.44
EFNB3Q15768 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.78■□□□□ 0.44
EFNB3Q15768 FAM21FP-204ENST00000608637 956 ntBASIC17.78■□□□□ 0.44
EFNB3Q15768 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.78■□□□□ 0.44
EFNB3Q15768 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
EFNB3Q15768 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EFNB3Q15768 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
EFNB3Q15768 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
EFNB3Q15768 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB3Q15768 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.77■□□□□ 0.44
EFNB3Q15768 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB3Q15768 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
EFNB3Q15768 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB3Q15768 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB3Q15768 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
EFNB3Q15768 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB3Q15768 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
EFNB3Q15768 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.77■□□□□ 0.44
EFNB3Q15768 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.77■□□□□ 0.44
EFNB3Q15768 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB3Q15768 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.77■□□□□ 0.44
EFNB3Q15768 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.77■□□□□ 0.44
EFNB3Q15768 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
EFNB3Q15768 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
EFNB3Q15768 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB3Q15768 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB3Q15768 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EFNB3Q15768 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EFNB3Q15768 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
EFNB3Q15768 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.77■□□□□ 0.43
EFNB3Q15768 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.76■□□□□ 0.43
EFNB3Q15768 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.76■□□□□ 0.43
EFNB3Q15768 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.76■□□□□ 0.43
EFNB3Q15768 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.76■□□□□ 0.43
EFNB3Q15768 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.76■□□□□ 0.43
EFNB3Q15768 AC092118.2-201ENST00000613495 667 ntBASIC17.76■□□□□ 0.43
EFNB3Q15768 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.76■□□□□ 0.43
EFNB3Q15768 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms