Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 IRA1YBR140C 9279 nt1.07□□□□□ -2.24
VPS13Q07878 YDL199CYDL199C 2064 nt1.07□□□□□ -2.24
VPS13Q07878 YLR154C-HYLR154C-H 132 nt1.07□□□□□ -2.24
VPS13Q07878 YLR156C-AYLR156C-A 132 nt1.07□□□□□ -2.24
VPS13Q07878 YLR157C-CYLR157C-C 132 nt1.07□□□□□ -2.24
VPS13Q07878 YLR159C-AYLR159C-A 132 nt1.07□□□□□ -2.24
VPS13Q07878 FAB1YFR019W 6837 nt1.07□□□□□ -2.24
VPS13Q07878 YBR139WYBR139W 1527 nt1.06□□□□□ -2.24
VPS13Q07878 FES1YBR101C 873 nt1.06□□□□□ -2.24
VPS13Q07878 AZF1YOR113W 2745 nt1.06□□□□□ -2.24
VPS13Q07878 PRP8YHR165C 7242 nt1.06□□□□□ -2.24
VPS13Q07878 YBR138CYBR138C 1575 nt1.06□□□□□ -2.24
VPS13Q07878 WBP1YEL002C 1293 nt1.06□□□□□ -2.24
VPS13Q07878 FAR11YNL127W 2862 nt1.05□□□□□ -2.24
VPS13Q07878 PTC5YOR090C 1719 nt1.05□□□□□ -2.24
VPS13Q07878 IRA2YOL081W 9240 nt1.05□□□□□ -2.24
VPS13Q07878 EAF5YEL018W 840 nt1.04□□□□□ -2.24
VPS13Q07878 YLR154W-AYLR154W-A 186 nt1.04□□□□□ -2.24
VPS13Q07878 RRP42YDL111C 798 nt1.04□□□□□ -2.24
VPS13Q07878 YKL070WYKL070W 510 nt1.04□□□□□ -2.24
VPS13Q07878 RFT1YBL020W 1725 nt1.04□□□□□ -2.24
VPS13Q07878 PEP7YDR323C 1548 nt1.04□□□□□ -2.24
VPS13Q07878 ADR1YDR216W 3972 nt1.04□□□□□ -2.24
VPS13Q07878 SMY2YBR172C 2223 nt1.04□□□□□ -2.24
VPS13Q07878 YGR027W-BYGR027W-B 5268 nt1.03□□□□□ -2.24
VPS13Q07878 YLR227W-BYLR227W-B 5268 nt1.03□□□□□ -2.24
VPS13Q07878 YPR158C-DYPR158C-D 5268 nt1.03□□□□□ -2.24
VPS13Q07878 YMR175W-AYMR175W-A 195 nt1.03□□□□□ -2.24
VPS13Q07878 YGL188CYGL188C 174 nt1.03□□□□□ -2.24
VPS13Q07878 YNL046WYNL046W 519 nt1.03□□□□□ -2.24
VPS13Q07878 YPR027CYPR027C 834 nt1.03□□□□□ -2.24
VPS13Q07878 BRE5YNR051C 1548 nt1.03□□□□□ -2.25
VPS13Q07878 MSS4YDR208W 2340 nt1.02□□□□□ -2.25
VPS13Q07878 YHL044WYHL044W 708 nt1.02□□□□□ -2.25
VPS13Q07878 GCD7YLR291C 1146 nt1.02□□□□□ -2.25
VPS13Q07878 PRP39YML046W 1890 nt1.02□□□□□ -2.25
VPS13Q07878 LIP2YLR239C 987 nt1.02□□□□□ -2.25
VPS13Q07878 RPL9AYGL147C 576 nt1.02□□□□□ -2.25
VPS13Q07878 YGR293CYGR293C 462 nt1.02□□□□□ -2.25
VPS13Q07878 SMC1YFL008W 3678 nt1.01□□□□□ -2.25
VPS13Q07878 YGL069CYGL069C 465 nt1.01□□□□□ -2.25
VPS13Q07878 ESF2YNR054C 951 nt1.01□□□□□ -2.25
VPS13Q07878 YDR034C-DYDR034C-D 5313 nt1.01□□□□□ -2.25
VPS13Q07878 YLR410W-BYLR410W-B 5313 nt1.01□□□□□ -2.25
VPS13Q07878 YCT1YLL055W 1596 nt1.01□□□□□ -2.25
VPS13Q07878 PPN1YDR452W 2025 nt1.01□□□□□ -2.25
VPS13Q07878 RPL6BYLR448W 531 nt1.01□□□□□ -2.25
VPS13Q07878 VPS9YML097C 1356 nt1.01□□□□□ -2.25
VPS13Q07878 RPL34BYIL052C 366 nt1□□□□□ -2.25
VPS13Q07878 TAZ1YPR140W 1146 nt1□□□□□ -2.25
VPS13Q07878 SEC63YOR254C 1992 nt1□□□□□ -2.25
VPS13Q07878 TCM62YBR044C 1719 nt1□□□□□ -2.25
VPS13Q07878 SPB4YFL002C 1821 nt1□□□□□ -2.25
VPS13Q07878 SKI8YGL213C 1194 nt1□□□□□ -2.25
VPS13Q07878 YJU2YKL095W 837 nt1□□□□□ -2.25
VPS13Q07878 TMA64YDR117C 1698 nt1□□□□□ -2.25
VPS13Q07878 RGA1YOR127W 3024 nt1□□□□□ -2.25
VPS13Q07878 MSS11YMR164C 2277 nt0.99□□□□□ -2.25
VPS13Q07878 GEA2YEL022W 4380 nt0.99□□□□□ -2.25
VPS13Q07878 SNO1YMR095C 675 nt0.99□□□□□ -2.25
VPS13Q07878 SSP2YOR242C 1116 nt0.99□□□□□ -2.25
VPS13Q07878 UBX3YDL091C 1368 nt0.99□□□□□ -2.25
VPS13Q07878 NHP2YDL208W 471 nt0.99□□□□□ -2.25
VPS13Q07878 FMP16YDR070C 282 nt0.99□□□□□ -2.25
VPS13Q07878 YER087C-AYER087C-A 552 nt0.99□□□□□ -2.25
VPS13Q07878 FZF1YGL254W 900 nt0.99□□□□□ -2.25
VPS13Q07878 VPS38YLR360W 1320 nt0.99□□□□□ -2.25
VPS13Q07878 URM1YIL008W 300 nt0.98□□□□□ -2.25
VPS13Q07878 PGD1YGL025C 1194 nt0.98□□□□□ -2.25
VPS13Q07878 TRS65YGR166W 1683 nt0.98□□□□□ -2.25
VPS13Q07878 CMC4YMR194C-B 222 nt0.98□□□□□ -2.25
VPS13Q07878 YIP3YNL044W 531 nt0.98□□□□□ -2.25
VPS13Q07878 SPR28YDR218C 1272 nt0.97□□□□□ -2.25
VPS13Q07878 SSU72YNL222W 621 nt0.97□□□□□ -2.25
VPS13Q07878 NEM1YHR004C 1341 nt0.97□□□□□ -2.25
VPS13Q07878 YLR419WYLR419W 4308 nt0.97□□□□□ -2.25
VPS13Q07878 YMR1YJR110W 2067 nt0.97□□□□□ -2.25
VPS13Q07878 MRPL40YPL173W 894 nt0.97□□□□□ -2.25
VPS13Q07878 GRR1YJR090C 3456 nt0.97□□□□□ -2.25
VPS13Q07878 PRS3YHL011C 963 nt0.96□□□□□ -2.26
VPS13Q07878 MIG2YGL209W 1149 nt0.96□□□□□ -2.26
VPS13Q07878 STN1YDR082W 1485 nt0.96□□□□□ -2.26
VPS13Q07878 PCL8YPL219W 1479 nt0.96□□□□□ -2.26
VPS13Q07878 FMP48YGR052W 1110 nt0.95□□□□□ -2.26
VPS13Q07878 YLR422WYLR422W 5799 nt0.95□□□□□ -2.26
VPS13Q07878 COS5YJR161C 1152 nt0.95□□□□□ -2.26
VPS13Q07878 LTE1YAL024C 4308 nt0.95□□□□□ -2.26
VPS13Q07878 USO1YDL058W 5373 nt0.95□□□□□ -2.26
VPS13Q07878 SET4YJL105W 1683 nt0.95□□□□□ -2.26
VPS13Q07878 RIC1YLR039C 3171 nt0.95□□□□□ -2.26
VPS13Q07878 RIO2YNL207W 1278 nt0.95□□□□□ -2.26
VPS13Q07878 IXR1YKL032C 1794 nt0.94□□□□□ -2.26
VPS13Q07878 SPC110YDR356W 2835 nt0.94□□□□□ -2.26
VPS13Q07878 RRP14YKL082C 1305 nt0.94□□□□□ -2.26
VPS13Q07878 KAP104YBR017C 2757 nt0.94□□□□□ -2.26
VPS13Q07878 IML1YJR138W 4755 nt0.94□□□□□ -2.26
VPS13Q07878 ARF1YDL192W 546 nt0.94□□□□□ -2.26
VPS13Q07878 YVH1YIR026C 1095 nt0.94□□□□□ -2.26
VPS13Q07878 YVC1YOR087W 2028 nt0.94□□□□□ -2.26
VPS13Q07878 RGA2YDR379W 3030 nt0.94□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 200.6 ms