Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SPCS3P61009 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.89■□□□□ 0.29
SPCS3P61009 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.89■□□□□ 0.29
SPCS3P61009 AL035685.1-201ENST00000636663 812 ntBASIC16.89■□□□□ 0.29
SPCS3P61009 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SPCS3P61009 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SPCS3P61009 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SPCS3P61009 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.88■□□□□ 0.29
SPCS3P61009 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SPCS3P61009 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 AC011298.3-201ENST00000615796 283 ntBASIC16.88■□□□□ 0.29
SPCS3P61009 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
SPCS3P61009 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SPCS3P61009 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SPCS3P61009 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SPCS3P61009 AC006128.1-201ENST00000624704 1661 ntBASIC16.88■□□□□ 0.29
SPCS3P61009 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.87■□□□□ 0.29
SPCS3P61009 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
SPCS3P61009 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SPCS3P61009 SLC47A1P1-202ENST00000449666 945 ntBASIC16.87■□□□□ 0.29
SPCS3P61009 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SPCS3P61009 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.87■□□□□ 0.29
SPCS3P61009 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.87■□□□□ 0.29
SPCS3P61009 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SPCS3P61009 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SPCS3P61009 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.87■□□□□ 0.29
SPCS3P61009 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SPCS3P61009 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
SPCS3P61009 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.86■□□□□ 0.29
SPCS3P61009 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.86■□□□□ 0.29
SPCS3P61009 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.86■□□□□ 0.29
SPCS3P61009 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SPCS3P61009 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.86■□□□□ 0.29
SPCS3P61009 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.86■□□□□ 0.29
SPCS3P61009 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.86■□□□□ 0.29
SPCS3P61009 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.86■□□□□ 0.29
SPCS3P61009 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.86■□□□□ 0.29
SPCS3P61009 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SPCS3P61009 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SPCS3P61009 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SPCS3P61009 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.85■□□□□ 0.29
SPCS3P61009 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.85■□□□□ 0.29
SPCS3P61009 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.85■□□□□ 0.29
SPCS3P61009 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.85■□□□□ 0.29
SPCS3P61009 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.85■□□□□ 0.29
SPCS3P61009 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.85■□□□□ 0.29
SPCS3P61009 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.85■□□□□ 0.29
SPCS3P61009 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SPCS3P61009 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SPCS3P61009 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.85■□□□□ 0.29
SPCS3P61009 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.85■□□□□ 0.29
SPCS3P61009 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.85■□□□□ 0.29
SPCS3P61009 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SPCS3P61009 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms