Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB38P57729 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB38P57729 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RAB38P57729 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RAB38P57729 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB38P57729 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB38P57729 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RAB38P57729 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
RAB38P57729 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.64■□□□□ 0.73
RAB38P57729 TERF1P5-201ENST00000477545 1207 ntBASIC19.64■□□□□ 0.73
RAB38P57729 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB38P57729 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.64■□□□□ 0.73
RAB38P57729 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB38P57729 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
RAB38P57729 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB38P57729 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB38P57729 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RAB38P57729 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RAB38P57729 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB38P57729 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RAB38P57729 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB38P57729 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB38P57729 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB38P57729 DUX4L16-201ENST00000555130 1264 ntBASIC19.63■□□□□ 0.73
RAB38P57729 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB38P57729 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB38P57729 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RAB38P57729 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RAB38P57729 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RAB38P57729 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB38P57729 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB38P57729 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB38P57729 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB38P57729 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB38P57729 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB38P57729 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RAB38P57729 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB38P57729 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB38P57729 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB38P57729 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB38P57729 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB38P57729 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB38P57729 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB38P57729 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.62■□□□□ 0.73
RAB38P57729 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB38P57729 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB38P57729 AC080038.1-201ENST00000611274 1154 ntBASIC19.62■□□□□ 0.73
RAB38P57729 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB38P57729 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB38P57729 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB38P57729 AL049796.1-201ENST00000565336 1766 ntBASIC19.62■□□□□ 0.73
RAB38P57729 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB38P57729 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB38P57729 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB38P57729 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB38P57729 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RAB38P57729 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB38P57729 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RAB38P57729 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB38P57729 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB38P57729 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RAB38P57729 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB38P57729 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB38P57729 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.61■□□□□ 0.73
RAB38P57729 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB38P57729 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB38P57729 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.61■□□□□ 0.73
RAB38P57729 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RAB38P57729 AC013268.1-206ENST00000638368 961 ntBASIC19.61■□□□□ 0.73
RAB38P57729 AC112229.1-201ENST00000639295 961 ntBASIC19.61■□□□□ 0.73
RAB38P57729 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB38P57729 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB38P57729 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB38P57729 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB38P57729 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAB38P57729 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB38P57729 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RAB38P57729 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB38P57729 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB38P57729 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB38P57729 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB38P57729 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB38P57729 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB38P57729 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB38P57729 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB38P57729 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB38P57729 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAB38P57729 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB38P57729 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB38P57729 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB38P57729 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB38P57729 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms