Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S2P56377 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
AP1S2P56377 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S2P56377 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
AP1S2P56377 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
AP1S2P56377 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S2P56377 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.28■□□□□ 0.84
AP1S2P56377 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.28■□□□□ 0.84
AP1S2P56377 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.28■□□□□ 0.84
AP1S2P56377 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.28■□□□□ 0.84
AP1S2P56377 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S2P56377 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.28■□□□□ 0.84
AP1S2P56377 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S2P56377 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S2P56377 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S2P56377 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
AP1S2P56377 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S2P56377 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.27■□□□□ 0.84
AP1S2P56377 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S2P56377 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
AP1S2P56377 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S2P56377 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S2P56377 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S2P56377 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S2P56377 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.27■□□□□ 0.84
AP1S2P56377 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.27■□□□□ 0.84
AP1S2P56377 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
AP1S2P56377 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.27■□□□□ 0.84
AP1S2P56377 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
AP1S2P56377 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S2P56377 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
AP1S2P56377 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.27■□□□□ 0.83
AP1S2P56377 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.26■□□□□ 0.83
AP1S2P56377 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S2P56377 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
AP1S2P56377 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S2P56377 AC245052.3-201ENST00000450182 901 ntBASIC20.26■□□□□ 0.83
AP1S2P56377 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
AP1S2P56377 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S2P56377 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.26■□□□□ 0.83
AP1S2P56377 SLC7A5P1-201ENST00000568957 537 ntBASIC20.26■□□□□ 0.83
AP1S2P56377 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.26■□□□□ 0.83
AP1S2P56377 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S2P56377 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S2P56377 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S2P56377 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S2P56377 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S2P56377 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S2P56377 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S2P56377 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S2P56377 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S2P56377 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.25■□□□□ 0.83
AP1S2P56377 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S2P56377 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S2P56377 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.25■□□□□ 0.83
AP1S2P56377 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S2P56377 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.25■□□□□ 0.83
AP1S2P56377 AC087623.3-201ENST00000607047 1098 ntBASIC20.25■□□□□ 0.83
AP1S2P56377 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.25■□□□□ 0.83
AP1S2P56377 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S2P56377 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S2P56377 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
AP1S2P56377 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
AP1S2P56377 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S2P56377 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.24■□□□□ 0.83
AP1S2P56377 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S2P56377 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.24■□□□□ 0.83
AP1S2P56377 SLC7A5P2-201ENST00000553010 536 ntBASIC20.24■□□□□ 0.83
AP1S2P56377 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S2P56377 KRT18P61-201ENST00000585825 1298 ntBASIC20.24■□□□□ 0.83
AP1S2P56377 NTF6G-201ENST00000591094 616 ntBASIC20.24■□□□□ 0.83
AP1S2P56377 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S2P56377 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S2P56377 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S2P56377 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.24■□□□□ 0.83
AP1S2P56377 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S2P56377 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S2P56377 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
AP1S2P56377 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S2P56377 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S2P56377 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S2P56377 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S2P56377 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.23■□□□□ 0.83
AP1S2P56377 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
AP1S2P56377 AC121338.2-201ENST00000622535 1744 ntBASIC20.23■□□□□ 0.83
AP1S2P56377 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S2P56377 RARRES2P11-201ENST00000635158 484 ntBASIC20.23■□□□□ 0.83
AP1S2P56377 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S2P56377 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S2P56377 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S2P56377 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S2P56377 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S2P56377 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.22■□□□□ 0.83
AP1S2P56377 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S2P56377 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S2P56377 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S2P56377 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.22■□□□□ 0.83
AP1S2P56377 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S2P56377 RARRES2P6-201ENST00000567333 442 ntBASIC20.22■□□□□ 0.83
AP1S2P56377 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms