Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH15P55291 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH15P55291 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH15P55291 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH15P55291 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH15P55291 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 AC006128.1-201ENST00000624704 1661 ntBASIC19.37■□□□□ 0.69
CDH15P55291 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH15P55291 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH15P55291 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH15P55291 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH15P55291 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH15P55291 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 MIR935-201ENST00000401179 91 ntBASIC19.37■□□□□ 0.69
CDH15P55291 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDH15P55291 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH15P55291 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH15P55291 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH15P55291 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH15P55291 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH15P55291 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CDH15P55291 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH15P55291 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
CDH15P55291 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH15P55291 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 AC018445.3-201ENST00000624177 1945 ntBASIC19.36■□□□□ 0.69
CDH15P55291 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CDH15P55291 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH15P55291 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH15P55291 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 AC027702.1-201ENST00000563810 1770 ntBASIC19.36■□□□□ 0.69
CDH15P55291 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH15P55291 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CDH15P55291 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH15P55291 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.35■□□□□ 0.69
CDH15P55291 MIR4466-201ENST00000606121 54 ntBASIC19.35■□□□□ 0.69
CDH15P55291 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CDH15P55291 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH15P55291 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CDH15P55291 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH15P55291 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CDH15P55291 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH15P55291 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDH15P55291 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH15P55291 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CDH15P55291 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CDH15P55291 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH15P55291 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH15P55291 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH15P55291 DUX4L4-201ENST00000566884 1269 ntBASIC19.34■□□□□ 0.69
CDH15P55291 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.34■□□□□ 0.69
CDH15P55291 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH15P55291 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH15P55291 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH15P55291 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH15P55291 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH15P55291 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH15P55291 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH15P55291 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.33■□□□□ 0.69
CDH15P55291 PLK5-205ENST00000642079 1969 ntBASIC19.33■□□□□ 0.69
CDH15P55291 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH15P55291 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CDH15P55291 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH15P55291 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH15P55291 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH15P55291 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH15P55291 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms