Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.26■□□□□ 0.51
HCFC1P51610 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC1P51610 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HCFC1P51610 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.26■□□□□ 0.51
HCFC1P51610 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC1P51610 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC1P51610 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.26■□□□□ 0.51
HCFC1P51610 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.26■□□□□ 0.51
HCFC1P51610 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC1P51610 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
HCFC1P51610 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.25■□□□□ 0.51
HCFC1P51610 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.25■□□□□ 0.51
HCFC1P51610 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.25■□□□□ 0.51
HCFC1P51610 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.25■□□□□ 0.51
HCFC1P51610 AC100791.3-201ENST00000617619 330 ntBASIC18.25■□□□□ 0.51
HCFC1P51610 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.25■□□□□ 0.51
HCFC1P51610 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HCFC1P51610 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.25■□□□□ 0.51
HCFC1P51610 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
HCFC1P51610 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HCFC1P51610 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HCFC1P51610 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.25■□□□□ 0.51
HCFC1P51610 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.25■□□□□ 0.51
HCFC1P51610 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.25■□□□□ 0.51
HCFC1P51610 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCFC1P51610 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HCFC1P51610 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCFC1P51610 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCFC1P51610 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HCFC1P51610 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.24■□□□□ 0.51
HCFC1P51610 C1QBPP2-201ENST00000528754 825 ntBASIC18.24■□□□□ 0.51
HCFC1P51610 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.24■□□□□ 0.51
HCFC1P51610 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.24■□□□□ 0.51
HCFC1P51610 AC069544.1-201ENST00000609399 999 ntBASIC18.24■□□□□ 0.51
HCFC1P51610 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCFC1P51610 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HCFC1P51610 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.24■□□□□ 0.51
HCFC1P51610 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCFC1P51610 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.23■□□□□ 0.51
HCFC1P51610 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.23■□□□□ 0.51
HCFC1P51610 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 C11orf96-202ENST00000528572 1834 ntBASIC18.23■□□□□ 0.51
HCFC1P51610 C1orf229-201ENST00000623686 2258 ntBASIC18.23■□□□□ 0.51
HCFC1P51610 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HCFC1P51610 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.23■□□□□ 0.51
HCFC1P51610 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HCFC1P51610 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.23■□□□□ 0.51
HCFC1P51610 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.23■□□□□ 0.51
HCFC1P51610 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.23■□□□□ 0.51
HCFC1P51610 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 AL117328.2-201ENST00000624617 1940 ntBASIC18.23■□□□□ 0.51
HCFC1P51610 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HCFC1P51610 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HCFC1P51610 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 KRT17P3-201ENST00000420566 1262 ntBASIC18.23■□□□□ 0.51
HCFC1P51610 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.23■□□□□ 0.51
HCFC1P51610 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.23■□□□□ 0.51
HCFC1P51610 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.23■□□□□ 0.51
HCFC1P51610 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.23■□□□□ 0.51
HCFC1P51610 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.23■□□□□ 0.51
HCFC1P51610 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HCFC1P51610 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 FAM21FP-204ENST00000608637 956 ntBASIC18.22■□□□□ 0.51
HCFC1P51610 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.22■□□□□ 0.51
HCFC1P51610 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HCFC1P51610 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.22■□□□□ 0.51
HCFC1P51610 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HCFC1P51610 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms