Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB28P51157 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.18■□□□□ 0.82
RAB28P51157 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB28P51157 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.18■□□□□ 0.82
RAB28P51157 CDCA4P2-201ENST00000441182 718 ntBASIC20.18■□□□□ 0.82
RAB28P51157 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RAB28P51157 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB28P51157 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.18■□□□□ 0.82
RAB28P51157 RARRES2P11-201ENST00000635158 484 ntBASIC20.18■□□□□ 0.82
RAB28P51157 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RAB28P51157 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RAB28P51157 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RAB28P51157 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB28P51157 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.18■□□□□ 0.82
RAB28P51157 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RAB28P51157 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB28P51157 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RAB28P51157 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB28P51157 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB28P51157 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB28P51157 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.17■□□□□ 0.82
RAB28P51157 AC007322.4-201ENST00000509611 723 ntBASIC20.17■□□□□ 0.82
RAB28P51157 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB28P51157 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB28P51157 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB28P51157 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
RAB28P51157 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB28P51157 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB28P51157 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB28P51157 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB28P51157 AC007322.1-201ENST00000426983 750 ntBASIC20.16■□□□□ 0.82
RAB28P51157 CNN2P6-201ENST00000439038 900 ntBASIC20.16■□□□□ 0.82
RAB28P51157 AC026185.1-201ENST00000445748 174 ntBASIC20.16■□□□□ 0.82
RAB28P51157 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB28P51157 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.16■□□□□ 0.82
RAB28P51157 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB28P51157 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
RAB28P51157 RAP2CP1-201ENST00000605103 478 ntBASIC20.16■□□□□ 0.82
RAB28P51157 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB28P51157 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB28P51157 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB28P51157 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB28P51157 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB28P51157 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB28P51157 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAB28P51157 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB28P51157 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB28P51157 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB28P51157 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB28P51157 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB28P51157 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB28P51157 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB28P51157 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB28P51157 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB28P51157 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB28P51157 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB28P51157 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB28P51157 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB28P51157 AL024507.2-201ENST00000606070 2574 ntBASIC20.15■□□□□ 0.82
RAB28P51157 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RAB28P51157 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB28P51157 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB28P51157 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB28P51157 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RAB28P51157 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB28P51157 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB28P51157 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RAB28P51157 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RAB28P51157 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB28P51157 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB28P51157 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB28P51157 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RAB28P51157 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB28P51157 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAB28P51157 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB28P51157 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RAB28P51157 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RAB28P51157 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB28P51157 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB28P51157 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB28P51157 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RAB28P51157 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAB28P51157 FEM1AP4-201ENST00000443167 1987 ntBASIC20.13■□□□□ 0.81
RAB28P51157 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RAB28P51157 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB28P51157 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB28P51157 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RAB28P51157 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB28P51157 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB28P51157 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RAB28P51157 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms