Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.82■■□□□ 1.08
SLC1A1P43005 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SLC1A1P43005 AC073130.3-201ENST00000624389 2278 ntBASIC21.82■■□□□ 1.08
SLC1A1P43005 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC1A1P43005 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC1A1P43005 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC1A1P43005 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SLC1A1P43005 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.82■■□□□ 1.08
SLC1A1P43005 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC1A1P43005 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC1A1P43005 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC1A1P43005 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC1A1P43005 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SLC1A1P43005 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC1A1P43005 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC1A1P43005 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC1A1P43005 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC1A1P43005 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC1A1P43005 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC1A1P43005 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SLC1A1P43005 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SLC1A1P43005 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC1A1P43005 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.81■■□□□ 1.08
SLC1A1P43005 AC061975.6-201ENST00000579045 1553 ntBASIC21.81■■□□□ 1.08
SLC1A1P43005 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC1A1P43005 GABARAPL3-202ENST00000624044 1851 ntBASIC21.81■■□□□ 1.08
SLC1A1P43005 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC1A1P43005 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC1A1P43005 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC1A1P43005 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SLC1A1P43005 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SLC1A1P43005 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SLC1A1P43005 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
SLC1A1P43005 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC1A1P43005 POU5F1P4-201ENST00000413175 1085 ntBASIC21.8■■□□□ 1.08
SLC1A1P43005 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC1A1P43005 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.8■■□□□ 1.08
SLC1A1P43005 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.8■■□□□ 1.08
SLC1A1P43005 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC1A1P43005 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC1A1P43005 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC1A1P43005 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SLC1A1P43005 AP005212.1-201ENST00000581547 1997 ntBASIC21.79■■□□□ 1.08
SLC1A1P43005 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.79■■□□□ 1.08
SLC1A1P43005 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC1A1P43005 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
SLC1A1P43005 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A1P43005 SLC25A24-204ENST00000569674 2357 ntBASIC21.79■■□□□ 1.08
SLC1A1P43005 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLC1A1P43005 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SLC1A1P43005 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A1P43005 AC008175.2-201ENST00000612840 297 ntBASIC21.79■■□□□ 1.08
SLC1A1P43005 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A1P43005 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC1A1P43005 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
SLC1A1P43005 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A1P43005 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A1P43005 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SLC1A1P43005 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLC1A1P43005 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC1A1P43005 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC1A1P43005 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SLC1A1P43005 KRT87P-202ENST00000534226 1464 ntBASIC21.78■■□□□ 1.08
SLC1A1P43005 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLC1A1P43005 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLC1A1P43005 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 AC079140.4-201ENST00000507448 529 ntBASIC21.78■■□□□ 1.08
SLC1A1P43005 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC1A1P43005 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC1A1P43005 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SLC1A1P43005 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC1A1P43005 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC1A1P43005 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A1P43005 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A1P43005 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A1P43005 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SLC1A1P43005 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SLC1A1P43005 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC1A1P43005 IRS3P-201ENST00000223076 1006 ntBASIC21.77■■□□□ 1.08
SLC1A1P43005 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A1P43005 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms