Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PTPN6P29350 YBX1P1-201ENST00000445822 960 ntBASIC19.78■□□□□ 0.76
PTPN6P29350 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PTPN6P29350 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN6P29350 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PTPN6P29350 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.78■□□□□ 0.76
PTPN6P29350 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN6P29350 AC073314.1-201ENST00000568729 2216 ntBASIC19.78■□□□□ 0.76
PTPN6P29350 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PTPN6P29350 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN6P29350 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPN6P29350 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PTPN6P29350 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
PTPN6P29350 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPN6P29350 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PTPN6P29350 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPN6P29350 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.77■□□□□ 0.75
PTPN6P29350 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPN6P29350 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.76■□□□□ 0.75
PTPN6P29350 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN6P29350 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN6P29350 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN6P29350 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN6P29350 GABARAPL3-202ENST00000624044 1851 ntBASIC19.76■□□□□ 0.75
PTPN6P29350 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN6P29350 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.76■□□□□ 0.75
PTPN6P29350 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN6P29350 AC087623.3-201ENST00000607047 1098 ntBASIC19.76■□□□□ 0.75
PTPN6P29350 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PTPN6P29350 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN6P29350 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PTPN6P29350 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PTPN6P29350 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN6P29350 AC123595.1-201ENST00000440769 1046 ntBASIC19.75■□□□□ 0.75
PTPN6P29350 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPN6P29350 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN6P29350 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPN6P29350 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PTPN6P29350 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PTPN6P29350 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PTPN6P29350 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN6P29350 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN6P29350 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN6P29350 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN6P29350 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN6P29350 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.74■□□□□ 0.75
PTPN6P29350 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN6P29350 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.74■□□□□ 0.75
PTPN6P29350 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN6P29350 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.74■□□□□ 0.75
PTPN6P29350 MIR5787-201ENST00000611784 55 ntBASIC19.74■□□□□ 0.75
PTPN6P29350 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN6P29350 AC005224.4-201ENST00000583262 1652 ntBASIC19.74■□□□□ 0.75
PTPN6P29350 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PTPN6P29350 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN6P29350 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN6P29350 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTPN6P29350 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN6P29350 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN6P29350 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN6P29350 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPN6P29350 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN6P29350 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN6P29350 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms