Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.57■□□□□ 0.88
LAMA1P25391 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMA1P25391 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LAMA1P25391 AC100791.3-201ENST00000617619 330 ntBASIC20.57■□□□□ 0.88
LAMA1P25391 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMA1P25391 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LAMA1P25391 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMA1P25391 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.57■□□□□ 0.88
LAMA1P25391 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.57■□□□□ 0.88
LAMA1P25391 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMA1P25391 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMA1P25391 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LAMA1P25391 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMA1P25391 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LAMA1P25391 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LAMA1P25391 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
LAMA1P25391 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LAMA1P25391 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LAMA1P25391 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.56■□□□□ 0.88
LAMA1P25391 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
LAMA1P25391 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMA1P25391 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMA1P25391 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.56■□□□□ 0.88
LAMA1P25391 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMA1P25391 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LAMA1P25391 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMA1P25391 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMA1P25391 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMA1P25391 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMA1P25391 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.56■□□□□ 0.88
LAMA1P25391 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.56■□□□□ 0.88
LAMA1P25391 AC079089.2-201ENST00000531211 1277 ntBASIC20.56■□□□□ 0.88
LAMA1P25391 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.56■□□□□ 0.88
LAMA1P25391 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.56■□□□□ 0.88
LAMA1P25391 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.56■□□□□ 0.88
LAMA1P25391 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.56■□□□□ 0.88
LAMA1P25391 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LAMA1P25391 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LAMA1P25391 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LAMA1P25391 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LAMA1P25391 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LAMA1P25391 RPS2P55-201ENST00000397318 883 ntBASIC20.55■□□□□ 0.88
LAMA1P25391 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.55■□□□□ 0.88
LAMA1P25391 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.55■□□□□ 0.88
LAMA1P25391 AC107956.1-201ENST00000494359 873 ntBASIC20.55■□□□□ 0.88
LAMA1P25391 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.55■□□□□ 0.88
LAMA1P25391 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LAMA1P25391 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LAMA1P25391 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LAMA1P25391 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LAMA1P25391 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.55■□□□□ 0.88
LAMA1P25391 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.55■□□□□ 0.88
LAMA1P25391 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LAMA1P25391 AC097493.4-201ENST00000641197 219 ntBASIC20.55■□□□□ 0.88
LAMA1P25391 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LAMA1P25391 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LAMA1P25391 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.55■□□□□ 0.88
LAMA1P25391 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LAMA1P25391 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.55■□□□□ 0.88
LAMA1P25391 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LAMA1P25391 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LAMA1P25391 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
LAMA1P25391 CYP2T3P-201ENST00000601990 817 ntBASIC20.55■□□□□ 0.88
LAMA1P25391 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LAMA1P25391 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LAMA1P25391 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LAMA1P25391 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
LAMA1P25391 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.54■□□□□ 0.88
LAMA1P25391 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LAMA1P25391 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LAMA1P25391 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.54■□□□□ 0.88
LAMA1P25391 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LAMA1P25391 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LAMA1P25391 LSM12P1-201ENST00000411836 588 ntBASIC20.54■□□□□ 0.88
LAMA1P25391 RN7SL850P-201ENST00000579959 291 ntBASIC20.54■□□□□ 0.88
LAMA1P25391 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LAMA1P25391 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LAMA1P25391 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA1P25391 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LAMA1P25391 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA1P25391 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA1P25391 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LAMA1P25391 AC092053.2-201ENST00000640557 1818 ntBASIC20.53■□□□□ 0.88
LAMA1P25391 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.53■□□□□ 0.88
LAMA1P25391 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.53■□□□□ 0.88
LAMA1P25391 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA1P25391 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA1P25391 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA1P25391 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA1P25391 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.53■□□□□ 0.88
LAMA1P25391 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.53■□□□□ 0.88
LAMA1P25391 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LAMA1P25391 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LAMA1P25391 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.53■□□□□ 0.88
LAMA1P25391 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.53■□□□□ 0.88
LAMA1P25391 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.53■□□□□ 0.88
LAMA1P25391 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LAMA1P25391 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LAMA1P25391 AC139530.1-201ENST00000575312 1977 ntBASIC20.53■□□□□ 0.88
LAMA1P25391 POM121L13P-201ENST00000422362 380 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms