Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CCL1P22362 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL1P22362 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CCL1P22362 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL1P22362 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCL1P22362 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL1P22362 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.97■□□□□ 0.47
CCL1P22362 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.97■□□□□ 0.47
CCL1P22362 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCL1P22362 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.97■□□□□ 0.47
CCL1P22362 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL1P22362 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCL1P22362 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCL1P22362 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCL1P22362 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCL1P22362 AC011484.1-201ENST00000377652 1995 ntBASIC17.97■□□□□ 0.47
CCL1P22362 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CCL1P22362 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCL1P22362 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CCL1P22362 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.96■□□□□ 0.47
CCL1P22362 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCL1P22362 POU5F1P4-201ENST00000413175 1085 ntBASIC17.96■□□□□ 0.47
CCL1P22362 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.96■□□□□ 0.47
CCL1P22362 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.96■□□□□ 0.47
CCL1P22362 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.96■□□□□ 0.47
CCL1P22362 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCL1P22362 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CCL1P22362 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.46
CCL1P22362 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CCL1P22362 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.96■□□□□ 0.46
CCL1P22362 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 KRT87P-202ENST00000534226 1464 ntBASIC17.95■□□□□ 0.46
CCL1P22362 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCL1P22362 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.95■□□□□ 0.46
CCL1P22362 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL1P22362 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL1P22362 AC008175.2-201ENST00000612840 297 ntBASIC17.95■□□□□ 0.46
CCL1P22362 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.95■□□□□ 0.46
CCL1P22362 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.95■□□□□ 0.46
CCL1P22362 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.95■□□□□ 0.46
CCL1P22362 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL1P22362 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCL1P22362 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CCL1P22362 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCL1P22362 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.94■□□□□ 0.46
CCL1P22362 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.94■□□□□ 0.46
CCL1P22362 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.94■□□□□ 0.46
CCL1P22362 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCL1P22362 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.94■□□□□ 0.46
CCL1P22362 AC092667.1-201ENST00000434301 2586 ntBASIC17.94■□□□□ 0.46
CCL1P22362 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.94■□□□□ 0.46
CCL1P22362 AC027702.1-201ENST00000563810 1770 ntBASIC17.94■□□□□ 0.46
CCL1P22362 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL1P22362 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.94■□□□□ 0.46
CCL1P22362 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCL1P22362 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.93■□□□□ 0.46
CCL1P22362 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCL1P22362 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCL1P22362 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CCL1P22362 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CCL1P22362 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CCL1P22362 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CCL1P22362 AC079140.4-201ENST00000507448 529 ntBASIC17.93■□□□□ 0.46
CCL1P22362 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCL1P22362 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL1P22362 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms