Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.87■□□□□ 0.29
DEFA4P12838 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.87■□□□□ 0.29
DEFA4P12838 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.87■□□□□ 0.29
DEFA4P12838 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.87■□□□□ 0.29
DEFA4P12838 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.87■□□□□ 0.29
DEFA4P12838 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.87■□□□□ 0.29
DEFA4P12838 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.87■□□□□ 0.29
DEFA4P12838 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
DEFA4P12838 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.87■□□□□ 0.29
DEFA4P12838 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
DEFA4P12838 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.87■□□□□ 0.29
DEFA4P12838 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DEFA4P12838 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
DEFA4P12838 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.86■□□□□ 0.29
DEFA4P12838 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.86■□□□□ 0.29
DEFA4P12838 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.86■□□□□ 0.29
DEFA4P12838 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEFA4P12838 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
DEFA4P12838 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEFA4P12838 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEFA4P12838 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEFA4P12838 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.86■□□□□ 0.29
DEFA4P12838 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEFA4P12838 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
DEFA4P12838 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.86■□□□□ 0.29
DEFA4P12838 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.86■□□□□ 0.29
DEFA4P12838 AC027682.1-201ENST00000562846 899 ntBASIC16.86■□□□□ 0.29
DEFA4P12838 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.86■□□□□ 0.29
DEFA4P12838 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEFA4P12838 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEFA4P12838 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DEFA4P12838 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.86■□□□□ 0.29
DEFA4P12838 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
DEFA4P12838 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
DEFA4P12838 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.85■□□□□ 0.29
DEFA4P12838 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.85■□□□□ 0.29
DEFA4P12838 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.85■□□□□ 0.29
DEFA4P12838 AC099791.1-201ENST00000416440 715 ntBASIC16.85■□□□□ 0.29
DEFA4P12838 AC106739.1-201ENST00000617035 715 ntBASIC16.85■□□□□ 0.29
DEFA4P12838 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.85■□□□□ 0.29
DEFA4P12838 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
DEFA4P12838 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.85■□□□□ 0.29
DEFA4P12838 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 PCDHAC2-203ENST00000615316 3011 ntBASIC16.85■□□□□ 0.29
DEFA4P12838 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DEFA4P12838 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DEFA4P12838 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEFA4P12838 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DEFA4P12838 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEFA4P12838 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.84■□□□□ 0.29
DEFA4P12838 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DEFA4P12838 IGHV3-19-201ENST00000521488 291 ntBASIC16.84■□□□□ 0.29
DEFA4P12838 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.84■□□□□ 0.29
DEFA4P12838 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
DEFA4P12838 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
DEFA4P12838 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEFA4P12838 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.84■□□□□ 0.29
DEFA4P12838 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.84■□□□□ 0.29
DEFA4P12838 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DEFA4P12838 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEFA4P12838 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DEFA4P12838 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
DEFA4P12838 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
DEFA4P12838 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
DEFA4P12838 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
DEFA4P12838 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 EDA-201ENST00000338901 1233 ntBASIC16.83■□□□□ 0.28
DEFA4P12838 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
DEFA4P12838 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.83■□□□□ 0.28
DEFA4P12838 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
DEFA4P12838 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.83■□□□□ 0.28
DEFA4P12838 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.83■□□□□ 0.28
DEFA4P12838 AL355001.2-201ENST00000620617 1191 ntBASIC16.83■□□□□ 0.28
DEFA4P12838 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
DEFA4P12838 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
DEFA4P12838 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
DEFA4P12838 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
DEFA4P12838 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.82■□□□□ 0.28
DEFA4P12838 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms