Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSF1P09603 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.96■□□□□ 0.47
CSF1P09603 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSF1P09603 EDA-201ENST00000338901 1233 ntBASIC17.96■□□□□ 0.47
CSF1P09603 AL355001.2-201ENST00000620617 1191 ntBASIC17.96■□□□□ 0.47
CSF1P09603 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CSF1P09603 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSF1P09603 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSF1P09603 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CSF1P09603 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CSF1P09603 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.96■□□□□ 0.47
CSF1P09603 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CSF1P09603 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
CSF1P09603 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CSF1P09603 AC009102.2-201ENST00000606772 1639 ntBASIC17.95■□□□□ 0.46
CSF1P09603 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CSF1P09603 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
CSF1P09603 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.95■□□□□ 0.46
CSF1P09603 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.95■□□□□ 0.46
CSF1P09603 AL499627.2-201ENST00000606283 725 ntBASIC17.95■□□□□ 0.46
CSF1P09603 MIR5787-201ENST00000611784 55 ntBASIC17.95■□□□□ 0.46
CSF1P09603 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CSF1P09603 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CSF1P09603 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CSF1P09603 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.94■□□□□ 0.46
CSF1P09603 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSF1P09603 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSF1P09603 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CSF1P09603 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSF1P09603 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CSF1P09603 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.94■□□□□ 0.46
CSF1P09603 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
CSF1P09603 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
CSF1P09603 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CSF1P09603 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.94■□□□□ 0.46
CSF1P09603 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CSF1P09603 SUDS3P1-201ENST00000505831 966 ntBASIC17.94■□□□□ 0.46
CSF1P09603 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.94■□□□□ 0.46
CSF1P09603 AC024257.2-201ENST00000549699 147 ntBASIC17.94■□□□□ 0.46
CSF1P09603 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CSF1P09603 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSF1P09603 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.94■□□□□ 0.46
CSF1P09603 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CSF1P09603 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CSF1P09603 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.94■□□□□ 0.46
CSF1P09603 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CSF1P09603 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CSF1P09603 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.93■□□□□ 0.46
CSF1P09603 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CSF1P09603 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.93■□□□□ 0.46
CSF1P09603 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CSF1P09603 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CSF1P09603 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSF1P09603 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.93■□□□□ 0.46
CSF1P09603 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CSF1P09603 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CSF1P09603 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.92■□□□□ 0.46
CSF1P09603 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CSF1P09603 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.92■□□□□ 0.46
CSF1P09603 DUX4L19-201ENST00000557448 1267 ntBASIC17.92■□□□□ 0.46
CSF1P09603 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CSF1P09603 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CSF1P09603 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.92■□□□□ 0.46
CSF1P09603 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.92■□□□□ 0.46
CSF1P09603 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSF1P09603 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms