Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC27.79■■■□□ 2.04
COL5A2P05997 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC27.79■■■□□ 2.04
COL5A2P05997 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
COL5A2P05997 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
COL5A2P05997 ISG20-202ENST00000379224 540 ntTSL 3 BASIC27.78■■■□□ 2.04
COL5A2P05997 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
COL5A2P05997 AC007322.3-201ENST00000426526 701 ntBASIC27.78■■■□□ 2.04
COL5A2P05997 MAX-217ENST00000557277 728 ntTSL 3 BASIC27.78■■■□□ 2.04
COL5A2P05997 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
COL5A2P05997 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
COL5A2P05997 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
COL5A2P05997 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
COL5A2P05997 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL5A2P05997 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL5A2P05997 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL5A2P05997 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL5A2P05997 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL5A2P05997 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC27.77■■■□□ 2.04
COL5A2P05997 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
COL5A2P05997 REXO1L12P-201ENST00000622156 912 ntBASIC27.77■■■□□ 2.04
COL5A2P05997 AC093323.1-202ENST00000635031 2045 ntBASIC27.77■■■□□ 2.04
COL5A2P05997 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
COL5A2P05997 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.77■■■□□ 2.04
COL5A2P05997 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC27.77■■■□□ 2.04
COL5A2P05997 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC27.77■■■□□ 2.04
COL5A2P05997 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
COL5A2P05997 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
COL5A2P05997 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
COL5A2P05997 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC27.76■■■□□ 2.04
COL5A2P05997 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
COL5A2P05997 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
COL5A2P05997 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL5A2P05997 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL5A2P05997 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL5A2P05997 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
COL5A2P05997 SERF2-207ENST00000409614 582 ntTSL 2 BASIC27.76■■■□□ 2.03
COL5A2P05997 TSPY7P-201ENST00000431358 1114 ntBASIC27.76■■■□□ 2.03
COL5A2P05997 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC27.76■■■□□ 2.03
COL5A2P05997 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL5A2P05997 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL5A2P05997 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.03
COL5A2P05997 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC27.76■■■□□ 2.03
COL5A2P05997 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL5A2P05997 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.75■■■□□ 2.03
COL5A2P05997 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.75■■■□□ 2.03
COL5A2P05997 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC27.75■■■□□ 2.03
COL5A2P05997 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL5A2P05997 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC27.75■■■□□ 2.03
COL5A2P05997 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL5A2P05997 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL5A2P05997 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
COL5A2P05997 RPS2P55-201ENST00000397318 883 ntBASIC27.75■■■□□ 2.03
COL5A2P05997 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL5A2P05997 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL5A2P05997 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL5A2P05997 AC107956.1-201ENST00000494359 873 ntBASIC27.75■■■□□ 2.03
COL5A2P05997 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL5A2P05997 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
COL5A2P05997 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC27.75■■■□□ 2.03
COL5A2P05997 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC27.75■■■□□ 2.03
COL5A2P05997 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.74■■■□□ 2.03
COL5A2P05997 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
COL5A2P05997 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC27.74■■■□□ 2.03
COL5A2P05997 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL5A2P05997 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL5A2P05997 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL5A2P05997 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL5A2P05997 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL5A2P05997 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
COL5A2P05997 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
COL5A2P05997 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC27.73■■■□□ 2.03
COL5A2P05997 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL5A2P05997 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.73■■■□□ 2.03
COL5A2P05997 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC27.72■■■□□ 2.03
COL5A2P05997 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
COL5A2P05997 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC27.72■■■□□ 2.03
COL5A2P05997 HES2-205ENST00000487437 968 ntTSL 3 BASIC27.72■■■□□ 2.03
COL5A2P05997 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC27.72■■■□□ 2.03
COL5A2P05997 AC124016.1-201ENST00000609552 612 ntBASIC27.72■■■□□ 2.03
COL5A2P05997 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC27.72■■■□□ 2.03
COL5A2P05997 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
COL5A2P05997 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.71■■■□□ 2.03
COL5A2P05997 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC27.71■■■□□ 2.03
COL5A2P05997 MTDHP1-201ENST00000605323 784 ntBASIC27.71■■■□□ 2.03
COL5A2P05997 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL5A2P05997 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL5A2P05997 AC026471.6-201ENST00000622954 1905 ntBASIC27.71■■■□□ 2.03
COL5A2P05997 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms