Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPP1R3DO95685 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPP1R3DO95685 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPP1R3DO95685 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.81■□□□□ 0.6
PPP1R3DO95685 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.81■□□□□ 0.6
PPP1R3DO95685 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PPP1R3DO95685 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPP1R3DO95685 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPP1R3DO95685 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPP1R3DO95685 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPP1R3DO95685 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.81■□□□□ 0.6
PPP1R3DO95685 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PPP1R3DO95685 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPP1R3DO95685 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PPP1R3DO95685 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
PPP1R3DO95685 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.81■□□□□ 0.6
PPP1R3DO95685 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPP1R3DO95685 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PPP1R3DO95685 AC121338.2-201ENST00000622535 1744 ntBASIC18.8■□□□□ 0.6
PPP1R3DO95685 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PPP1R3DO95685 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
PPP1R3DO95685 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PPP1R3DO95685 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PPP1R3DO95685 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 EDA-201ENST00000338901 1233 ntBASIC18.79■□□□□ 0.6
PPP1R3DO95685 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.79■□□□□ 0.6
PPP1R3DO95685 MIR572-201ENST00000384983 95 ntBASIC18.79■□□□□ 0.6
PPP1R3DO95685 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.79■□□□□ 0.6
PPP1R3DO95685 AF213884.3-201ENST00000563833 479 ntBASIC18.79■□□□□ 0.6
PPP1R3DO95685 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.79■□□□□ 0.6
PPP1R3DO95685 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PPP1R3DO95685 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PPP1R3DO95685 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.79■□□□□ 0.6
PPP1R3DO95685 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP1R3DO95685 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PPP1R3DO95685 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PPP1R3DO95685 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP1R3DO95685 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP1R3DO95685 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP1R3DO95685 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.78■□□□□ 0.6
PPP1R3DO95685 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PPP1R3DO95685 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PPP1R3DO95685 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP1R3DO95685 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPP1R3DO95685 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP1R3DO95685 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP1R3DO95685 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.77■□□□□ 0.6
PPP1R3DO95685 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.77■□□□□ 0.6
PPP1R3DO95685 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.77■□□□□ 0.6
PPP1R3DO95685 MIR939-201ENST00000401314 82 ntBASIC18.77■□□□□ 0.6
PPP1R3DO95685 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.77■□□□□ 0.6
PPP1R3DO95685 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.77■□□□□ 0.6
PPP1R3DO95685 AC110285.6-201ENST00000617652 491 ntBASIC18.77■□□□□ 0.6
PPP1R3DO95685 AL355001.2-201ENST00000620617 1191 ntBASIC18.77■□□□□ 0.6
PPP1R3DO95685 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PPP1R3DO95685 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.77■□□□□ 0.6
PPP1R3DO95685 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PPP1R3DO95685 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP1R3DO95685 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP1R3DO95685 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PPP1R3DO95685 RASA4CP-201ENST00000424092 1398 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms