Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PFDN1O60925 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
PFDN1O60925 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PFDN1O60925 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PFDN1O60925 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PFDN1O60925 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN1O60925 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN1O60925 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.7■□□□□ 0.58
PFDN1O60925 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.7■□□□□ 0.58
PFDN1O60925 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PFDN1O60925 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN1O60925 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN1O60925 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.7■□□□□ 0.58
PFDN1O60925 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN1O60925 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.7■□□□□ 0.58
PFDN1O60925 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN1O60925 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PFDN1O60925 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PFDN1O60925 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.69■□□□□ 0.58
PFDN1O60925 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.69■□□□□ 0.58
PFDN1O60925 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.69■□□□□ 0.58
PFDN1O60925 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.69■□□□□ 0.58
PFDN1O60925 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PFDN1O60925 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.69■□□□□ 0.58
PFDN1O60925 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PFDN1O60925 AC144652.1-201ENST00000609974 1624 ntBASIC18.69■□□□□ 0.58
PFDN1O60925 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PFDN1O60925 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PFDN1O60925 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.69■□□□□ 0.58
PFDN1O60925 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN1O60925 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PFDN1O60925 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.68■□□□□ 0.58
PFDN1O60925 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.68■□□□□ 0.58
PFDN1O60925 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN1O60925 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN1O60925 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN1O60925 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN1O60925 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN1O60925 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PFDN1O60925 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PFDN1O60925 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN1O60925 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.68■□□□□ 0.58
PFDN1O60925 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.68■□□□□ 0.58
PFDN1O60925 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN1O60925 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PFDN1O60925 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN1O60925 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN1O60925 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.67■□□□□ 0.58
PFDN1O60925 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.67■□□□□ 0.58
PFDN1O60925 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
PFDN1O60925 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PFDN1O60925 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN1O60925 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PFDN1O60925 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN1O60925 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN1O60925 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN1O60925 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.67■□□□□ 0.58
PFDN1O60925 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PFDN1O60925 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PFDN1O60925 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
PFDN1O60925 PCDHB18P-201ENST00000524813 2368 ntBASIC18.67■□□□□ 0.58
PFDN1O60925 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
PFDN1O60925 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.66■□□□□ 0.58
PFDN1O60925 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.66■□□□□ 0.58
PFDN1O60925 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PFDN1O60925 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.66■□□□□ 0.58
PFDN1O60925 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.66■□□□□ 0.58
PFDN1O60925 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.66■□□□□ 0.58
PFDN1O60925 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PFDN1O60925 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 OXCT2P1-201ENST00000447263 1535 ntBASIC18.65■□□□□ 0.58
PFDN1O60925 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PFDN1O60925 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PFDN1O60925 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms