Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EDF1O60869 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
EDF1O60869 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
EDF1O60869 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EDF1O60869 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EDF1O60869 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EDF1O60869 KRT125P-201ENST00000546827 989 ntBASIC20.52■□□□□ 0.88
EDF1O60869 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
EDF1O60869 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EDF1O60869 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
EDF1O60869 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
EDF1O60869 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
EDF1O60869 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EDF1O60869 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EDF1O60869 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
EDF1O60869 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EDF1O60869 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EDF1O60869 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EDF1O60869 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EDF1O60869 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EDF1O60869 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.51■□□□□ 0.87
EDF1O60869 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
EDF1O60869 FP700111.2-201ENST00000619190 1892 ntBASIC20.51■□□□□ 0.87
EDF1O60869 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EDF1O60869 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EDF1O60869 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EDF1O60869 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
EDF1O60869 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EDF1O60869 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
EDF1O60869 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
EDF1O60869 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
EDF1O60869 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.5■□□□□ 0.87
EDF1O60869 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
EDF1O60869 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EDF1O60869 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EDF1O60869 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.5■□□□□ 0.87
EDF1O60869 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EDF1O60869 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
EDF1O60869 AL033527.3-201ENST00000566366 1196 ntBASIC20.5■□□□□ 0.87
EDF1O60869 AC010525.1-201ENST00000585559 441 ntBASIC20.5■□□□□ 0.87
EDF1O60869 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.5■□□□□ 0.87
EDF1O60869 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EDF1O60869 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EDF1O60869 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EDF1O60869 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.5■□□□□ 0.87
EDF1O60869 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
EDF1O60869 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
EDF1O60869 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EDF1O60869 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
EDF1O60869 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EDF1O60869 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EDF1O60869 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.49■□□□□ 0.87
EDF1O60869 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
EDF1O60869 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
EDF1O60869 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.49■□□□□ 0.87
EDF1O60869 MIR3181-201ENST00000578512 73 ntBASIC20.49■□□□□ 0.87
EDF1O60869 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EDF1O60869 AC012354.3-201ENST00000623734 483 ntBASIC20.49■□□□□ 0.87
EDF1O60869 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EDF1O60869 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
EDF1O60869 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EDF1O60869 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EDF1O60869 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
EDF1O60869 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EDF1O60869 AC018445.3-201ENST00000624177 1945 ntBASIC20.49■□□□□ 0.87
EDF1O60869 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EDF1O60869 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
EDF1O60869 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.48■□□□□ 0.87
EDF1O60869 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
EDF1O60869 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
EDF1O60869 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.48■□□□□ 0.87
EDF1O60869 AC099791.2-201ENST00000605725 427 ntBASIC20.48■□□□□ 0.87
EDF1O60869 MIR4787-201ENST00000607364 84 ntBASIC20.48■□□□□ 0.87
EDF1O60869 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
EDF1O60869 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EDF1O60869 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EDF1O60869 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EDF1O60869 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
EDF1O60869 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
EDF1O60869 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
EDF1O60869 BX323043.1-201ENST00000641006 1765 ntBASIC20.47■□□□□ 0.87
EDF1O60869 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.47■□□□□ 0.87
EDF1O60869 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
EDF1O60869 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EDF1O60869 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EDF1O60869 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
EDF1O60869 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EDF1O60869 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms