Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
YJEFN3A6XGL0 AC231657.2-201ENST00000624556 255 ntBASIC21.83■■□□□ 1.09
YJEFN3A6XGL0 AC013268.1-206ENST00000638368 961 ntBASIC21.83■■□□□ 1.09
YJEFN3A6XGL0 AC112229.1-201ENST00000639295 961 ntBASIC21.83■■□□□ 1.09
YJEFN3A6XGL0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
YJEFN3A6XGL0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
YJEFN3A6XGL0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
YJEFN3A6XGL0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
YJEFN3A6XGL0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
YJEFN3A6XGL0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
YJEFN3A6XGL0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
YJEFN3A6XGL0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
YJEFN3A6XGL0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
YJEFN3A6XGL0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
YJEFN3A6XGL0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 AC007322.1-201ENST00000426983 750 ntBASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 CROCCP5-201ENST00000436658 830 ntBASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 AC245052.3-201ENST00000450182 901 ntBASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
YJEFN3A6XGL0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
YJEFN3A6XGL0 FEM1AP4-201ENST00000443167 1987 ntBASIC21.8■■□□□ 1.08
YJEFN3A6XGL0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.8■■□□□ 1.08
YJEFN3A6XGL0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
YJEFN3A6XGL0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
YJEFN3A6XGL0 AC007322.4-201ENST00000509611 723 ntBASIC21.8■■□□□ 1.08
YJEFN3A6XGL0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.8■■□□□ 1.08
YJEFN3A6XGL0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.8■■□□□ 1.08
YJEFN3A6XGL0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
YJEFN3A6XGL0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 AC091799.1-201ENST00000422823 811 ntBASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 AC068338.2-201ENST00000563278 1430 ntBASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 AF106564.1-201ENST00000607058 2553 ntBASIC21.79■■□□□ 1.08
YJEFN3A6XGL0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 AL050303.2-201ENST00000619798 666 ntBASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.78■■□□□ 1.08
YJEFN3A6XGL0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 MIR663A-201ENST00000385250 93 ntBASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 AC005181.1-201ENST00000604782 1256 ntBASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
YJEFN3A6XGL0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms