Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PCDHAC2-203ENST00000615316 3011 ntBASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.11■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AC007225.1-201ENST00000566331 1836 ntBASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 AC024257.2-201ENST00000549699 147 ntBASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV4-1A0A0J9YWV2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.08■□□□□ 0.65
TRBV4-1A0A0J9YWV2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.08■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
TRBV4-1A0A0J9YWV2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV4-1A0A0J9YWV2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV4-1A0A0J9YWV2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV4-1A0A0J9YWV2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AL121603.2-201ENST00000557373 2117 ntBASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC005224.4-201ENST00000583262 1652 ntBASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRBV4-1A0A0J9YWV2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AL136162.1-201ENST00000607711 1078 ntBASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV4-1A0A0J9YWV2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 AC020907.5-201ENST00000624372 1936 ntBASIC19.06■□□□□ 0.64
TRBV4-1A0A0J9YWV2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms