Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV13-2A0A0B4J235 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRAV13-2A0A0B4J235 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
TRAV13-2A0A0B4J235 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 RPS2P35-201ENST00000443417 897 ntBASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRAV13-2A0A0B4J235 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 OR7E47P-201ENST00000546390 1422 ntBASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 AC120024.1-201ENST00000562672 995 ntBASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 AC019171.1-201ENST00000601251 1056 ntBASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV13-2A0A0B4J235 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 AC079089.2-201ENST00000531211 1277 ntBASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV13-2A0A0B4J235 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
TRAV13-2A0A0B4J235 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms