Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-3A0A0A0MS03 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRBV5-3A0A0A0MS03 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-3A0A0A0MS03 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV5-3A0A0A0MS03 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-3A0A0A0MS03 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-3A0A0A0MS03 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.58■□□□□ 0.72
TRBV5-3A0A0A0MS03 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-3A0A0A0MS03 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.58■□□□□ 0.72
TRBV5-3A0A0A0MS03 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-3A0A0A0MS03 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-3A0A0A0MS03 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV5-3A0A0A0MS03 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 TSPY26P-201ENST00000476365 1326 ntBASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC099791.1-201ENST00000416440 715 ntBASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC008764.7-201ENST00000593779 1081 ntBASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV5-3A0A0A0MS03 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC053503.5-201ENST00000601508 636 ntBASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 AL512408.1-201ENST00000569378 2000 ntBASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC011484.1-201ENST00000377652 1995 ntBASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 AC027682.1-201ENST00000562846 899 ntBASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 AL391422.3-201ENST00000603791 2761 ntBASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV5-3A0A0A0MS03 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 FP700111.2-201ENST00000619190 1892 ntBASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.54■□□□□ 0.72
TRBV5-3A0A0A0MS03 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.53■□□□□ 0.72
TRBV5-3A0A0A0MS03 MIR572-201ENST00000384983 95 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms