Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV9-1A0A075B6T8 AF131216.4-201ENST00000638924 1588 ntBASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV9-1A0A075B6T8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 AC121338.2-201ENST00000622535 1744 ntBASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAV9-1A0A075B6T8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 TCF3P1-201ENST00000423021 1937 ntBASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 AP004607.7-201ENST00000527152 1677 ntBASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV9-1A0A075B6T8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 AC009831.1-201ENST00000580420 1582 ntBASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
TRAV9-1A0A075B6T8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms