Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV6A0A075B6T7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV6A0A075B6T7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV6A0A075B6T7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV6A0A075B6T7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV6A0A075B6T7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV6A0A075B6T7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV6A0A075B6T7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 ABHD17AP4-201ENST00000411545 909 ntBASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 MIR4281-201ENST00000580852 62 ntBASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRAV6A0A075B6T7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 AC026471.1-201ENST00000564629 3026 ntBASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV6A0A075B6T7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 AC004408.2-201ENST00000623613 2777 ntBASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 AP000974.1-201ENST00000623909 2387 ntBASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV6A0A075B6T7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV6A0A075B6T7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms