Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
IGKV2-28A0A075B6P5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 OR7E47P-201ENST00000546390 1422 ntBASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
IGKV2-28A0A075B6P5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 PLK5-205ENST00000642079 1969 ntBASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 AL451085.2-201ENST00000605085 799 ntBASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 AL117332.1-201ENST00000622628 974 ntBASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
IGKV2-28A0A075B6P5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 AC027702.1-201ENST00000563810 1770 ntBASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
IGKV2-28A0A075B6P5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 UNC93B8-201ENST00000511903 705 ntBASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 MIR6724-1-201ENST00000616420 92 ntBASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 MIR6724-2-201ENST00000616483 92 ntBASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 MIR6724-4-201ENST00000617390 92 ntBASIC13.72□□□□□ -0.21
IGKV2-28A0A075B6P5 MIR6724-3-201ENST00000622482 92 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms