Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 Z98882.1-201ENST00000622160 2253 ntBASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 AC079140.4-201ENST00000507448 529 ntBASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DRB4X5D2U9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DRB4X5D2U9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 RNF165-205ENST00000588679 2904 ntBASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRB4X5D2U9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 KRT87P-202ENST00000534226 1464 ntBASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DRB4X5D2U9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.64■□□□□ 0.1
HLA-DRB4X5D2U9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.64■□□□□ 0.1
HLA-DRB4X5D2U9 LINC01521-201ENST00000504184 1943 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms