Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 RAP2CP1-201ENST00000605103 478 ntBASIC20.52■□□□□ 0.88
DNMT3AQ9Y6K1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3AQ9Y6K1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3AQ9Y6K1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3AQ9Y6K1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.52■□□□□ 0.88
DNMT3AQ9Y6K1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3AQ9Y6K1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DNMT3AQ9Y6K1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
DNMT3AQ9Y6K1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
DNMT3AQ9Y6K1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 AC007322.1-201ENST00000426983 750 ntBASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.51■□□□□ 0.87
DNMT3AQ9Y6K1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DNMT3AQ9Y6K1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 AL162412.1-201ENST00000567129 965 ntBASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.49■□□□□ 0.87
DNMT3AQ9Y6K1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 CNN2P6-201ENST00000439038 900 ntBASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DNMT3AQ9Y6K1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 AC090192.1-201ENST00000517740 490 ntBASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DNMT3AQ9Y6K1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 Z98882.1-201ENST00000622160 2253 ntBASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DNMT3AQ9Y6K1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms