Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLDN16Q9Y5I7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN16Q9Y5I7 FEM1AP4-201ENST00000443167 1987 ntBASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 AC007322.4-201ENST00000509611 723 ntBASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN16Q9Y5I7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 AC091799.1-201ENST00000422823 811 ntBASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 CROCCP5-201ENST00000436658 830 ntBASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN16Q9Y5I7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLDN16Q9Y5I7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 AC090192.1-201ENST00000517740 490 ntBASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 AC013268.1-206ENST00000638368 961 ntBASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 AC112229.1-201ENST00000639295 961 ntBASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLDN16Q9Y5I7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 AC026185.1-201ENST00000445748 174 ntBASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 AL050303.2-201ENST00000619798 666 ntBASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 AC231657.2-201ENST00000624556 255 ntBASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 AC068338.2-201ENST00000563278 1430 ntBASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN16Q9Y5I7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN16Q9Y5I7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms