Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PCDHB13Q9Y5F0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PCDHB13Q9Y5F0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PCDHB13Q9Y5F0 KRT16P2-201ENST00000414673 1423 ntBASIC23.07■■□□□ 1.28
PCDHB13Q9Y5F0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PCDHB13Q9Y5F0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 AL162430.1-201ENST00000480705 870 ntBASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB13Q9Y5F0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB13Q9Y5F0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 SLC7A5P2-201ENST00000553010 536 ntBASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
PCDHB13Q9Y5F0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB13Q9Y5F0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB13Q9Y5F0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB13Q9Y5F0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDHB13Q9Y5F0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDHB13Q9Y5F0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB13Q9Y5F0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.02■■□□□ 1.28
PCDHB13Q9Y5F0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 SLC7A5P1-201ENST00000568957 537 ntBASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 AL049796.1-201ENST00000565336 1766 ntBASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHB13Q9Y5F0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23■■□□□ 1.27
PCDHB13Q9Y5F0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.99■■□□□ 1.27
PCDHB13Q9Y5F0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB13Q9Y5F0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB13Q9Y5F0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB13Q9Y5F0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHB13Q9Y5F0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB13Q9Y5F0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB13Q9Y5F0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHB13Q9Y5F0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB13Q9Y5F0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms