Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC42Q9Y546 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 AC005332.7-201ENST00000614046 2005 ntBASIC19.71■□□□□ 0.75
LRRC42Q9Y546 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LRRC42Q9Y546 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 MIR4449-201ENST00000578365 66 ntBASIC19.7■□□□□ 0.74
LRRC42Q9Y546 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 TCF3P1-201ENST00000423021 1937 ntBASIC19.7■□□□□ 0.74
LRRC42Q9Y546 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC42Q9Y546 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 AC004448.1-201ENST00000458332 883 ntBASIC19.69■□□□□ 0.74
LRRC42Q9Y546 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC42Q9Y546 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 AC087393.1-201ENST00000582896 145 ntBASIC19.68■□□□□ 0.74
LRRC42Q9Y546 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
LRRC42Q9Y546 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRRC42Q9Y546 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRRC42Q9Y546 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms