Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MRPS28Q9Y2Q9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPS28Q9Y2Q9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MRPS28Q9Y2Q9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPS28Q9Y2Q9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MRPS28Q9Y2Q9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.97■□□□□ 0.47
MRPS28Q9Y2Q9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 PLK5-205ENST00000642079 1969 ntBASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 AC092667.1-201ENST00000434301 2586 ntBASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MRPS28Q9Y2Q9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 BX842568.3-201ENST00000418104 571 ntBASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MRPS28Q9Y2Q9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 GABARAPL3-202ENST00000624044 1851 ntBASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MRPS28Q9Y2Q9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 AC133561.4-201ENST00000566112 224 ntBASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 MIR4767-201ENST00000582827 78 ntBASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MRPS28Q9Y2Q9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MRPS28Q9Y2Q9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms