Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPS3Q9UNS2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPS3Q9UNS2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPS3Q9UNS2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 AL136116.3-201ENST00000402907 1138 ntBASIC18.57■□□□□ 0.56
COPS3Q9UNS2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 AC073314.1-201ENST00000568729 2216 ntBASIC18.57■□□□□ 0.56
COPS3Q9UNS2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
COPS3Q9UNS2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COPS3Q9UNS2 AP005212.1-201ENST00000581547 1997 ntBASIC18.55■□□□□ 0.56
COPS3Q9UNS2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 UNC93B3-201ENST00000308076 687 ntBASIC18.55■□□□□ 0.56
COPS3Q9UNS2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COPS3Q9UNS2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COPS3Q9UNS2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms