Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 TMPOP1-202ENST00000424642 1267 ntBASIC20.81■□□□□ 0.92
NCDNQ9UBB6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 KRT18P35-201ENST00000510488 1269 ntBASIC20.81■□□□□ 0.92
NCDNQ9UBB6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 MIR4785-201ENST00000585005 73 ntBASIC20.81■□□□□ 0.92
NCDNQ9UBB6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCDNQ9UBB6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 AL589743.5-201ENST00000616611 1050 ntBASIC20.8■□□□□ 0.92
NCDNQ9UBB6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
NCDNQ9UBB6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 AC004812.2-201ENST00000611079 2094 ntBASIC20.79■□□□□ 0.92
NCDNQ9UBB6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCDNQ9UBB6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 AC133561.1-201ENST00000568600 2415 ntBASIC20.78■□□□□ 0.92
NCDNQ9UBB6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 AL049637.2-201ENST00000641778 930 ntBASIC20.78■□□□□ 0.92
NCDNQ9UBB6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCDNQ9UBB6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 AC097493.4-201ENST00000641197 219 ntBASIC20.77■□□□□ 0.92
NCDNQ9UBB6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCDNQ9UBB6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NCDNQ9UBB6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.77■□□□□ 0.91
NCDNQ9UBB6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NCDNQ9UBB6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCDNQ9UBB6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCDNQ9UBB6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCDNQ9UBB6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCDNQ9UBB6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCDNQ9UBB6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms