Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC52A3Q9NQ40 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC52A3Q9NQ40 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SLC52A3Q9NQ40 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC52A3Q9NQ40 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC52A3Q9NQ40 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC52A3Q9NQ40 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC52A3Q9NQ40 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC52A3Q9NQ40 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC52A3Q9NQ40 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SLC52A3Q9NQ40 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC52A3Q9NQ40 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC52A3Q9NQ40 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SLC52A3Q9NQ40 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC52A3Q9NQ40 AL512408.1-201ENST00000569378 2000 ntBASIC19.83■□□□□ 0.76
SLC52A3Q9NQ40 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC52A3Q9NQ40 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SLC52A3Q9NQ40 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.83■□□□□ 0.76
SLC52A3Q9NQ40 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC52A3Q9NQ40 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 AC007952.6-201ENST00000573168 2673 ntBASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 AC003957.1-201ENST00000625108 2673 ntBASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC52A3Q9NQ40 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 MIR4767-201ENST00000582827 78 ntBASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 AC233992.3-201ENST00000607491 485 ntBASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SLC52A3Q9NQ40 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 AC005224.4-201ENST00000583262 1652 ntBASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC52A3Q9NQ40 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC52A3Q9NQ40 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms