Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC073314.1-201ENST00000568729 2216 ntBASIC18.92■□□□□ 0.62
HMG20AQ9NP66 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 AC026471.1-201ENST00000564629 3026 ntBASIC18.91■□□□□ 0.62
HMG20AQ9NP66 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HMG20AQ9NP66 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 AC098818.2-201ENST00000564925 2320 ntBASIC18.9■□□□□ 0.62
HMG20AQ9NP66 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20AQ9NP66 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HMG20AQ9NP66 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HMG20AQ9NP66 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.89■□□□□ 0.62
HMG20AQ9NP66 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 MIR4787-201ENST00000607364 84 ntBASIC18.89■□□□□ 0.61
HMG20AQ9NP66 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20AQ9NP66 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20AQ9NP66 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 AC239859.2-201ENST00000444165 318 ntBASIC18.87■□□□□ 0.61
HMG20AQ9NP66 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HMG20AQ9NP66 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms