Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRTM1Q9HBL6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 AC006128.1-201ENST00000624704 1661 ntBASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 AL136967.2-201ENST00000623968 743 ntBASIC20.08■□□□□ 0.81
LRTM1Q9HBL6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.08■□□□□ 0.8
LRTM1Q9HBL6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
LRTM1Q9HBL6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
LRTM1Q9HBL6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.08■□□□□ 0.8
LRTM1Q9HBL6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LRTM1Q9HBL6 AC073130.3-201ENST00000624389 2278 ntBASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 PLK5-205ENST00000642079 1969 ntBASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 AL031432.3-201ENST00000607698 485 ntBASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRTM1Q9HBL6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.06■□□□□ 0.8
LRTM1Q9HBL6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LRTM1Q9HBL6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 LINC01006-201ENST00000333319 2292 ntBASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 AC012414.1-201ENST00000556676 535 ntBASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 AC121338.2-201ENST00000622535 1744 ntBASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRTM1Q9HBL6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.03■□□□□ 0.8
LRTM1Q9HBL6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms