Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NANOGQ9H9S0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 SMUG1P1-201ENST00000590640 811 ntBASIC19.8■□□□□ 0.76
NANOGQ9H9S0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.8■□□□□ 0.76
NANOGQ9H9S0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.79■□□□□ 0.76
NANOGQ9H9S0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NANOGQ9H9S0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 AC007225.1-201ENST00000566331 1836 ntBASIC19.78■□□□□ 0.76
NANOGQ9H9S0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NANOGQ9H9S0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.77■□□□□ 0.76
NANOGQ9H9S0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
NANOGQ9H9S0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 AC020907.5-201ENST00000624372 1936 ntBASIC19.76■□□□□ 0.75
NANOGQ9H9S0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
NANOGQ9H9S0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms