Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 PBX2P1-201ENST00000493219 1291 ntBASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 AP001330.3-201ENST00000520123 633 ntBASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMEM38AQ9H6F2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 AC096631.2-201ENST00000436136 790 ntBASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMEM38AQ9H6F2 RASA4CP-201ENST00000424092 1398 ntBASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 AC092667.1-201ENST00000434301 2586 ntBASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 EEF1DP3-203ENST00000566025 782 ntBASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 AC053503.5-201ENST00000601508 636 ntBASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 AC008406.3-201ENST00000620001 1374 ntBASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM38AQ9H6F2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 AL355001.2-201ENST00000620617 1191 ntBASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 AC007225.1-201ENST00000566331 1836 ntBASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
TMEM38AQ9H6F2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 MIR939-201ENST00000401314 82 ntBASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMEM38AQ9H6F2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms